| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2938 |
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| Symbol | |
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| ID | 4023441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3272181 |
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| End bp | 3273461 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963138 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_570066 |
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| Protein GI | 91977407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.926877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCA ACGATCTCCA ACGCCGAATC CTTGATGCCG TCGATGCCGG CTTCGATGCC
CAGCTTGCCG CCACGCGAGA TTTTGTCGCG ATCCCAAGTA CGCGCGGCGC GGAAGGCCCT
TGCCAGGATA TGATCGGCGA TCTGCTGCGG CAGCGCGGCT ATGAGGTCGA CGACTGGTAC
ATCGACCTCG ATGATTTGAA GGATCTGCGC GGCTACGGTC CGATCGCGCA CGACTTCTCC
AAGGCCCGAA CGGTGGTCGG GACCTACCGT CCAGCGAACA ACGCGGGCCG CTCGTTGATT
CTGCAGGGAC ATTGCGATGT CGTGCCGACC GGACCGCTGG AGATGTGGGA CACGCCGCCG
TTTTCGCCGG TCGTGAAGGA CGGCCGGATG TATGGCCGCG GCGCGTGCGA CATGAAGTCG
GGCACCATCG GCGCGCTGTA CGCGCTCGAC GCCATCAAGG CCGCGGGGCT GGCGCCGACC
GGGCGCATCC ATTTCCAATC GGTGATCGAG GAGGAGAGCA CGGGCGTCGG CGCGCTGTCG
ACGTTGCAGC GCGGCTATCG TGCCGATTGC TGCTTCATTC CGGAGCCCAC CGGCGGAAAG
ATGGTGCGCT CGCAGGTCGG CGTGATCTGG TTTCGTCTCA AGGTGCGCGG CCATCCGGTC
CATGTGTTCG AAGCCGGCTC CGGCTCGAAC GCGATCACGG CGGCCTATCA TCTGATCCAT
GCGCTGGAGA CACTCGAGGC GGAGTGGAAT AAGCGCGCGG CGGATGACCA CCATTTCAAG
GGCGTAGTGC ACCCGATCAA CTTCAATCCC GGCATCATCA AGGGCGGTGA CTGGGCTTCC
AGCGTGCCGG CGTGGTGCGA TGTCGACTGC CGGATCGCGA TCCTGCCGGG CTGGTCGATC
GCCGACCATC AGGCCGAGAT CCTCGCTTGC GTTGCGGCCG CAGCGCGCGA TCACCGGTTT
CTGTCGAACA ATCCGCCGCA GGTGGAGTGG TCGGGCTTTC TGTCGGACGG GTACGAACTG
ACGGATTCCG CCGAGCCCGA AGCAGCCTTC GGCAAGGCTT ACAATGCGGT CTATGGCGGC
GCGGTGTCGG ATCTCGTGTT CACCGCGCTG ACCGACACGC GGTTCTACGG GCTGAACTAC
AACATCCCCA GCCTGTGCTT CGGCGCCAGC GGCGCGGCGA TGCACGGCTT CAATGAATAC
GTCGACCTCG AATCGCTGCG GCAATCCACC AAGGCCACCG CACTGTTCAT TGCCGAGTGG
TGCGGCGTCG AGCCGACTTA G
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| Protein sequence | MSVNDLQRRI LDAVDAGFDA QLAATRDFVA IPSTRGAEGP CQDMIGDLLR QRGYEVDDWY
IDLDDLKDLR GYGPIAHDFS KARTVVGTYR PANNAGRSLI LQGHCDVVPT GPLEMWDTPP
FSPVVKDGRM YGRGACDMKS GTIGALYALD AIKAAGLAPT GRIHFQSVIE EESTGVGALS
TLQRGYRADC CFIPEPTGGK MVRSQVGVIW FRLKVRGHPV HVFEAGSGSN AITAAYHLIH
ALETLEAEWN KRAADDHHFK GVVHPINFNP GIIKGGDWAS SVPAWCDVDC RIAILPGWSI
ADHQAEILAC VAAAARDHRF LSNNPPQVEW SGFLSDGYEL TDSAEPEAAF GKAYNAVYGG
AVSDLVFTAL TDTRFYGLNY NIPSLCFGAS GAAMHGFNEY VDLESLRQST KATALFIAEW
CGVEPT
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