| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2906 |
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| Symbol | |
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| ID | 4023407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3238481 |
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| End bp | 3239470 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963107 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_570035 |
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| Protein GI | 91977376 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0831474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.102099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA ACAAGAAGAA ACTGCTGGTG ACGGAATCGC TGTCGGAACG GGGCAGGGCG
TTGTTCCAGG AGCGCGGCGA CATCGAGGTC GTCGAATTCC CCAACATGAT TTCCGCCGCC
GATTTCGAGA CGCTGCTGCA CACCCAGGCG CCGGTGCACG GCGTCGCGCT CGGCGCGACG
CGGTTCGGCG AGACCGAACT CGCAGCCTCC AAGGACATGA AAGTGGTGGC GCGGATCGGC
GTCGGCTACG ACGCCGTCGA CGTCCATGCG CTGAGCAGGC GCAAGGTGCC GCTGATGGTC
GCCGGCACCG CGAATTCGCC GTCGGTCGCC GAGCAGGCGC TGTTCATGAT GCTGACGCTG
GCCAAACGCG GCGTCGAACT GCATGCGCTG GTCAAGACCG GCGCATGGGC GACGCGGCTC
GGGCTGTTGC CGTTCGACCT GTTCGGCAAG ACAGTGCTGA TCGTCGGGTT CGGACGGATC
GGCACCCGCA CCGCGAAGCG CTGCCTCGCG ATGGAAATGA CCGTGCTGGT GTACGATCCG
TACAAATCCG TGGATGGGAT CGAAGCCGCC GGTTGTGAGA AGGTCGACGA TCTCGATGCG
GCGTTGCCGC GTGCCGATTT CGTCAGCCTG CATTGCCCGA AGACGACGGA GACCACCGGT
CTGTTCGACG CCGTACGGCT GTCGAAGATG AAGGCGACGG CCTATCTGAT CAACACCGCA
CGCGGCGGTA TCATCGTCGA AGCCGCGCTG TACGACGCGC TGGTCGCGGG CCAGCTCGCC
GGCGCCGGGC TCGACGTGTT CGAGCAGGAA CCGCCGCCGC TCGGCCACAA GCTGTTCGAC
CTGCCCAATG TGATCATTGC GCCGCATGTC GCCGGGGTCA CCCGCGAGGC GCTCGACCGG
ATGGGCGAGC AGACCGCGCG CAACATGCTG AGTGCGCTCG ACGGCCAGCC GATCCGCGCC
AATGTGATCA ATCAGGACGT GCTCGGCTGA
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| Protein sequence | MTTNKKKLLV TESLSERGRA LFQERGDIEV VEFPNMISAA DFETLLHTQA PVHGVALGAT
RFGETELAAS KDMKVVARIG VGYDAVDVHA LSRRKVPLMV AGTANSPSVA EQALFMMLTL
AKRGVELHAL VKTGAWATRL GLLPFDLFGK TVLIVGFGRI GTRTAKRCLA MEMTVLVYDP
YKSVDGIEAA GCEKVDDLDA ALPRADFVSL HCPKTTETTG LFDAVRLSKM KATAYLINTA
RGGIIVEAAL YDALVAGQLA GAGLDVFEQE PPPLGHKLFD LPNVIIAPHV AGVTREALDR
MGEQTARNML SALDGQPIRA NVINQDVLG
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