| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2886 |
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| Symbol | |
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| ID | 4023384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3214719 |
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| End bp | 3215318 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963084 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_570015 |
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| Protein GI | 91977356 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.150043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.102099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACAGC AAGCGTCGGC AATGCGTCCC GAAGGCGCGC AGCCGCTGAT CGCGCGCGCG
CCGAGCGGCA TCATCGATCC CAACACCGGA AAGCCTGTTG GCGCAGATGA TCCGTTCTTC
CTGGGCGTCA ATCGCGAGTT GTCCGACAAG GGCTTCTTCG TTGCAGCGAC CGACGATCTG
ATCACCTGGG CGCGCACCGG ATCGCTGATG TGGATGACAT TCGGTCTTGC CTGCTGCGCG
GTCGAGATGA TGCAGTTGTC GATGCCGCGA TACGACGCCG AACGTTTCGG CTTTGCGCCG
CGCGCCTCGC CGCGCCAGTC CGACGTCATG ATCGTGGCCG GAACGCTGAC CAACAAGATG
GCCCCGGCGC TGCGCAAGGT CTACGACCAG ATGCCGGAGC CGCGTTACGT GATCTCGATG
GGATCATGCG CCAACGGCGG CGGCTATTAT CACTACTCCT ATTCCGTGGT GCGCGGCTGC
GATCGCATCG TCCCGATCGA CATCTATGTT CCGGGCTGCC CGCCGACCGC AGAAGCTCTG
CTGTACGGCG TGATGCTGCT GCAGAAGAAG ATCCGTCGGA CTGGCACTAT CGAACGCTGA
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| Protein sequence | MQQQASAMRP EGAQPLIARA PSGIIDPNTG KPVGADDPFF LGVNRELSDK GFFVAATDDL
ITWARTGSLM WMTFGLACCA VEMMQLSMPR YDAERFGFAP RASPRQSDVM IVAGTLTNKM
APALRKVYDQ MPEPRYVISM GSCANGGGYY HYSYSVVRGC DRIVPIDIYV PGCPPTAEAL
LYGVMLLQKK IRRTGTIER
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