| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2885 |
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| Symbol | |
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| ID | 4023383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3214091 |
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| End bp | 3214705 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963083 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_570014 |
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| Protein GI | 91977355 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.419864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.101064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACA ACGGGCTCGA CACCCTGGGT CAGACGATCG TCGGCGCCTT GCCGGGTGCT
GCGATCGGTC ACGTGGTCAC GTATAGCGAA CTGACCGTGA CGATCGACTC CACGAAGGTG
GTGGATGTGG TGCGGTTCCT GCGCGACGAT CCGCGCTGCC GCTTCATCAA TATCGTCGAC
GTCACCGCGG TCGACTATCC GGGCCGCGTG CCGCGCTTCG ATCTGGTGTA TCACTTCCTG
TCGCCGACGC TGAATGCGCG AATCCGGCTG CGCGCCGAAG TCGGCGAAAC CACTTTGGTG
CCGTCGATCA TCAGCGTGTT TCCGGGCACC GACTGGTTCG AACGCGAGGT CTACGACCTC
TATGGCATCA TCATCACCGG CCACCCCGAT ATGCGCCGGT TGCTCACCGA TTACGGCTTC
GATGGCCATC CGCTGCGCAA GGATTTTCCG CTCACCGGCT TCGTCGAAGT CCGCTACGAC
GACGACCAGA AGCGGGTGGT CTACGAGCCG GTGCGGCTCA ACCAGGAATT CCGCAAATTC
GATTTCCAGT CGCCGTGGGA AGGAGCGGAC TATCCGATCC TGCCGGGCGA CGAGAAGGCC
GGGGTGAAGC CGTGA
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| Protein sequence | MDDNGLDTLG QTIVGALPGA AIGHVVTYSE LTVTIDSTKV VDVVRFLRDD PRCRFINIVD
VTAVDYPGRV PRFDLVYHFL SPTLNARIRL RAEVGETTLV PSIISVFPGT DWFEREVYDL
YGIIITGHPD MRRLLTDYGF DGHPLRKDFP LTGFVEVRYD DDQKRVVYEP VRLNQEFRKF
DFQSPWEGAD YPILPGDEKA GVKP
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