| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2884 |
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| Symbol | |
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| ID | 4023382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3212786 |
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| End bp | 3214036 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963082 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_570013 |
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| Protein GI | 91977354 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.736243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.115348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CTCCCATGGC TCAAGCTCCT ACGGCTCAAG CTCCCACGGC TGAAGCCGCT
GCCGAGGCCC CGGGCCTGCG CAACTTCACG ATCAATTTCG GACCGCAGCA CCCGGCGGCG
CATGGCGTGT TGCGATTGGT GCTGGAACTC GATGGCGAAG TGGTCGAGCG GGTCGATCCG
CATATCGGCC TTCTGCATCG CGGCACCGAG AAGCTGATCG AGCACAAGAC CTATCTGCAG
GCGATCCCGT ATTTCGACCG GCTCGACTAC GTCGCGCCGA TGAATCAGGA GCACGCGTTC
TGCCTCGCGG TGGAGAAGCT GCTCGGCATC GCCGTGCCGC GCCGCGCGCA GCTGATCCGC
GTGCTGTATT GCGAGATCGG ACGCATCCTG TCGCATCTGC TCAACGTCAC CACTCAGGCG
ATGGACGTCG GCGCGCTGAC CCCGCCGCTG TGGGGGTTCG AGGAACGCGA AAAGCTGATG
ATGTTCTACG AGCGCGCCTC CGGCAGCCGG ATGCACGCGG CGTATTTCCG CGTCGGCGGC
GTGCATCAGG ATCTGCCGCC GCAGCTCGTC GCGGATATCG ACAGCTGGTG CGACAGCTTC
ATTCAGGTGG TCGACGATCT CGAGACGCTG CTCACCGACA ACCGCATTTT CAAGCAGCGC
AACGTCGACA TCGGCGTGGT GACGCTGGAG CAGGCGTGGG AATGGGGCTT CTCCGGGGTA
ATGGTGCGCG GCTCCGGCGC CGCCTGGGAT CTGCGCAAGT CGCAGCCCTA CGAGTGCTAC
GCCGAGATGG ATTTCGACAT TCCGATCGGC AAGAACGGCG ACTGCTACGA CCGCTATTGC
CTGCGCGTCG AGGAGATGCG GCAGTCGATT CGGATCATGA AGCAGTGCAT CGCCAAGCTG
CGCGCGCCGG ACGGGCAGGG CCGGGTGGCG ATCGACGACA ACAAGATCTT CCCGCCGCGC
CGTGGCGAGA TGAAGCGCTC GATGGAATCG CTGATCCATC ACTTCAAGCT GTACACCGAG
GGCTTCCGCG TGCCGGAAGG CGAGGTCTAT GTCGCGGTCG AGGCGCCGAA GGGCGAGTTC
GGCGTGTATC TGGTCTCGGA CGGCAGCAAC AAGCCGTACA AGTGCAAGAT CCGCGCGCCG
GGCTTCGCGC ATCTGCAGGC GATGGACTTC ATCTGCCGCG GCCATCTGCT CGCCGACGTT
TCGGCGATCC TGGGTTCCCT CGACATCGTG TTCGGAGAGG TCGATCGGTG A
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| Protein sequence | MAEAPMAQAP TAQAPTAEAA AEAPGLRNFT INFGPQHPAA HGVLRLVLEL DGEVVERVDP
HIGLLHRGTE KLIEHKTYLQ AIPYFDRLDY VAPMNQEHAF CLAVEKLLGI AVPRRAQLIR
VLYCEIGRIL SHLLNVTTQA MDVGALTPPL WGFEEREKLM MFYERASGSR MHAAYFRVGG
VHQDLPPQLV ADIDSWCDSF IQVVDDLETL LTDNRIFKQR NVDIGVVTLE QAWEWGFSGV
MVRGSGAAWD LRKSQPYECY AEMDFDIPIG KNGDCYDRYC LRVEEMRQSI RIMKQCIAKL
RAPDGQGRVA IDDNKIFPPR RGEMKRSMES LIHHFKLYTE GFRVPEGEVY VAVEAPKGEF
GVYLVSDGSN KPYKCKIRAP GFAHLQAMDF ICRGHLLADV SAILGSLDIV FGEVDR
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