| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2880 |
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| Symbol | |
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| ID | 4023378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3209510 |
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| End bp | 3210835 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963078 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_570009 |
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| Protein GI | 91977350 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.756344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.115348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACG ACAAGGACCG CATCTTCCGG AACCTGTACG GGCTCGACGA CTGGGGCCTC
AAAGGCGCGC GCCGTCGCGG CCAATGGGAA GGCACCAAGG CGATCATCGA CAAGGGCCGC
GACTGGATCA TCAGCGAGAT GAAGGCGTCG GGCCTGCGCG GCCGCGGCGG CGCCGGCTTC
CCGACCGGCC TGAAATGGTC CTTCATGCCG AAGGACAATG CCGACGGCCG GCCGAGCTAT
CTCGTCGTCA ACGCCGACGA GTCGGAGCCC GGAACCTGCA AAGACCGCGA GATCATGCGG
CACGATCCGC ACACGTTGGT CGAGGGTTGC CTCGTCGCCG GCTGCGCGAT GGGCGCCCAT
GTCGGCTACA TCTATGTCCG CGGTGAGTTC ATCCGCGAGC GCGAGCATCT GCAGGCGGCG
ATCGATCAGG CCTACGAGGC CAAGCTGATC GGCAAGGACA ACGTCCACGG CTTTCCGTTC
GACCTCTATG TCGCGCACGG CGCCGGCGCC TATATCTGCG GCGAAGAGAC CGCGCTGCTG
GAGAGCCTCG AAGGCAAGAA GGGCCAGCCG CGGCTGAAGC CGCCGTTCCC GGCCAATGTC
GGCCTGTATG GCTGCCCGAC CACCGTCAAC AACGTCGAGT CGATCGCGGT GGCGCCGGAC
ATCCTGCGCC GCGGCGCATC CTGGTTCGCC GGCATCGGCC GGGCGAACAA TGTCGGCACG
AAGCTGTACG GCATCTCCGG CCACGTCAAC ACGCCCTGCG TCGTCGAAGA GGCGATGAGC
ATCCCGTTCC GCGAACTGAT CGAAAAGCAC GGCGGCGGCA TCCGCGGCGG CTGGGACAAT
CTGCTGGCGA TCATTCCCGG CGGCGCGTCG TGTCCGCTGA TCCCGGCAGC CGATTGCCAA
GAGCTGATCA TGGATTTCGA CGGCACCCGC GCGGTGAAGT CGAGCTTCGG CACCGCCGGC
GTGATCGTGA TGGACAAGTC CACCGACATC GTCGCCGCGA TCGCCCGCAT CAGCTACTTC
TTCAAACACG AGAGCTGCGG CCAGTGCACG CCGTGCCGCG AGGGCACCGG CTGGATGTGG
CGCGTGCTCG ACCGGATGGT GCACGGCCGC GCCCACAAGC GCGAGATCGA CATGCTGCTG
GAGGTCACCA AGCAGGTCGA AGGCCACACC ATCTGCGCGC TCGGCGACGC CGCGGCCTGG
CCGATTCAGG GCCTGATCCG CGCCTTCCGC CCGGAGATCG AGCGCCGCAT CGACGATTTC
TCGCGCAAGG CCACGCTCGA CGATCAGGGC GTGCTCGATC CGGCGCATAT GGTGGCGGCG
GAGTAA
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| Protein sequence | MLDDKDRIFR NLYGLDDWGL KGARRRGQWE GTKAIIDKGR DWIISEMKAS GLRGRGGAGF
PTGLKWSFMP KDNADGRPSY LVVNADESEP GTCKDREIMR HDPHTLVEGC LVAGCAMGAH
VGYIYVRGEF IREREHLQAA IDQAYEAKLI GKDNVHGFPF DLYVAHGAGA YICGEETALL
ESLEGKKGQP RLKPPFPANV GLYGCPTTVN NVESIAVAPD ILRRGASWFA GIGRANNVGT
KLYGISGHVN TPCVVEEAMS IPFRELIEKH GGGIRGGWDN LLAIIPGGAS CPLIPAADCQ
ELIMDFDGTR AVKSSFGTAG VIVMDKSTDI VAAIARISYF FKHESCGQCT PCREGTGWMW
RVLDRMVHGR AHKREIDMLL EVTKQVEGHT ICALGDAAAW PIQGLIRAFR PEIERRIDDF
SRKATLDDQG VLDPAHMVAA E
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