| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2879 |
|---|
| Symbol | |
|---|
| ID | 4023377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3207429 |
|---|
| End bp | 3209504 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637963077 |
|---|
| Product | NADH dehydrogenase subunit G |
|---|
| Protein accession | YP_570008 |
|---|
| Protein GI | 91977349 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
|---|
| TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.644938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.120527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA TCATCGTCGA CGGCAAGGAA GTCGAGGTTC CGCCGGAATA CACGCTGCTG
CAGGCCTGCG AACAGGCCGG CGCGGAGATT CCGCGGTTCT GCTATCACGA GCGGCTGTCG
ATCGCCGGCA ATTGCCGGAT GTGTCTGGTC GAGCTGAAGG GCACGCCGAA GCCGGTGGCG
AGCTGCGCAT GGGGCGTGCG CGATTGTCGG CCCGGCCCGA ACGGCGAGCT GCCTGAGATC
AACACCAAAT CGCCGATGGT GAAGAAGGCC CGCGAGGGCG TGATGGAGTT CCTGCTGATC
AACCATCCGC TCGACTGCCC GATCTGCGAT CAGGGCGGCG AGTGCGACCT GCAGGATCAG
GCGATGGGCT ACGGCGTCGA CTCCAGCCGC TTCGCCGAGA ACAAGCGCGC GGTCGAGGAC
AAGTACCTCG GCGTGCTGGT CAAGACCTCG ATGAACCGCT GCATCCAGTG CACCCGCTGC
GTGCGCTTCG CCGCCGAAGT CTGCGGCGTG CCGGAAATGG GCGCGACCGG TCGCGGCGAG
GACATGGAGA TAACCACCTA TCTCGAAAGC GCTCTGACCT CGGAGCTGCA GGGCAATCTG
GTCGACATCT GCCCGGTGGG CGCGCTGACC TCGAAGCCTT ACGCGTTCGC GGCGCGTCCC
TGGGAGCTCG GCAAGACGCA GTCGATCGAT GTCATGGACG GCTTGGGCTC GGCGATCCGG
GTCGACACCC GTGGCCGCGA GGTGATGCGG ATCCTGCCGC GCATCAACGA GGCGATCAAC
GAGGAGTGGA TTTCCGACAA GACCCGCCAT GTCATCGACG GACTGCGCAC CCAGCGCCTC
GACCAGCCCT ATGTCCGCGA GGGCGGCAAG CTGCGTCCGG CGAGCTGGCC GGAAGCGTTC
GGCGCCATCA AGGCGAAACT CGCCGGCGTC GGCGGCAAGA AGATCGGCGC GATCGCCGGC
GATCTCGCCG CGGTCGAGGA GATGTTCGCG CTGAAGCAGT TGCTCGAAAA GCTCGGCTCT
TCGAACCTCG CAGCCCCGAG CGTCGCGGCG TTCGATCCGA AGGCGGGACG GGCGTCCTAC
ATCTTCAATC CCACCATCGC CGGCATCGAG CAGGCCGACG CGCTGCTGAT CATCGGCTCC
AACCCGCGCA AGGAAGCGGC GATTCTCAAC GCCCGCATCC GCAAGCGCTG GCGCAGCGGC
GGGATGCCGA TCGGCGTGAT CGGCGAGCAG GCGGATTTGA CCTATCCGAC CGACTATCTC
GGCGCCGGCG CCGAGACGCT GGCCGACATC GCGTCGGGCA AACATCCGTT CGCCGAGACG
CTGAAGAAGG CCAAGCACCC GATCGTGCTG ATCGGCGCCG CGGCGATTTC ACGCCGCGAT
GGCGCAGCGC TGCTGTCGGC GGCCGCCAAG CTCGCCGTCG ATGTCGGCGC GCTGGCCGAC
GGCTGGAACG GTTTCGCGGT TCTGCATCCG GCGGCATCGA GCGTCGGTGC GCTGGACATC
GGCTTTGCGC CCGGCGCAGG CGGCATGGAC GCCACGCAGA TGACCACGCA GGGCGCGATC
GACGTGCTGT TCTCGCTCGG CTCCGACGAA GTGAAGCTGC CGGACGGCGC GTTCGTGGTC
TATATCGGCA CCCATGGCGA CCGCGGGGCG CATCGCGCCG ACGTCATTCT GCCGGGCGCG
GCCTATACCG AGAAGTCGGG CATCTACGTC AACACCGAGG GCCGTGTGCA GATCGCCAAT
CGCGCGTCGT TCCCGCCGGG CGAGGCGCGC GAAGACTGGT CGATCATCCG CGCGCTGTCG
GAAGCGCTCG GCCACAAGCT GCCCTACGAC TCTCTGGCTG CGCTGCGAAA GGCGATCTTT
GCCGCCGTGC CGCATTTGAT GCGGGTCGAC CAGATCGAGG CCGGCGACGC CGGCGCCGTG
CGCACGCTCG CCGCCGCCGG CGGCAGCGTC GACAAGGCGC CGTTCAAGCC GGCGATTTCC
GATTTCTACA TGACCAACCC GATCGCGCGG GCCTCGGCCG TGATGGCGGA ATGCTCCCGC
CTTGCGTCGG GGCAGTTGCT GACGGCGGCG GAGTAG
|
|---|
| Protein sequence | MIKIIVDGKE VEVPPEYTLL QACEQAGAEI PRFCYHERLS IAGNCRMCLV ELKGTPKPVA
SCAWGVRDCR PGPNGELPEI NTKSPMVKKA REGVMEFLLI NHPLDCPICD QGGECDLQDQ
AMGYGVDSSR FAENKRAVED KYLGVLVKTS MNRCIQCTRC VRFAAEVCGV PEMGATGRGE
DMEITTYLES ALTSELQGNL VDICPVGALT SKPYAFAARP WELGKTQSID VMDGLGSAIR
VDTRGREVMR ILPRINEAIN EEWISDKTRH VIDGLRTQRL DQPYVREGGK LRPASWPEAF
GAIKAKLAGV GGKKIGAIAG DLAAVEEMFA LKQLLEKLGS SNLAAPSVAA FDPKAGRASY
IFNPTIAGIE QADALLIIGS NPRKEAAILN ARIRKRWRSG GMPIGVIGEQ ADLTYPTDYL
GAGAETLADI ASGKHPFAET LKKAKHPIVL IGAAAISRRD GAALLSAAAK LAVDVGALAD
GWNGFAVLHP AASSVGALDI GFAPGAGGMD ATQMTTQGAI DVLFSLGSDE VKLPDGAFVV
YIGTHGDRGA HRADVILPGA AYTEKSGIYV NTEGRVQIAN RASFPPGEAR EDWSIIRALS
EALGHKLPYD SLAALRKAIF AAVPHLMRVD QIEAGDAGAV RTLAAAGGSV DKAPFKPAIS
DFYMTNPIAR ASAVMAECSR LASGQLLTAA E
|
|---|
| |