Gene RPD_2866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2866 
Symbol 
ID4023364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3194912 
End bp3195433 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID637963064 
Producthypothetical protein 
Protein accessionYP_569995 
Protein GI91977336 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.573109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.396245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC TCATTCGTAC ATTCGCCTCC GTTGCCGCCG TCAGCCTGCT GTCCGTCGCC 
GCCGTACAGG CGGCCGAAAT CAAGGCCGGC GATCTGGTGA TCACCGAAGC CTGGAGCCGC
GCGACGCCCG GTGGCGCCAA GGTCGCCGGC GGCTTCCTGA CCATCGACAA CAAGGGCGCT
GCGGCCGACC GGCTGGTGTC GGCGACGGCC GACGTCGCCG GCAAGGTCGA GGTCCACGAG
ATGTCGATGG ACAACGGCGT GATGAAGATG CGGCTGCTGG ACAAGGGCCT TTCAATCGAG
CCGGGCAAGA CCGTCAAGCT CGCGCCGGGC GGCTATCACA TCATGCTGCT GGACCTGAAA
GGCCCGCTCA AGGAAGGCGA GAAGGTGCCG GTCACGCTGC AATTCGAAAA GGCCGGTAAG
GTGCCGGTCA CGCTCGACGT CGCGGGCGTC GGCGCCAAGG CGCCGGGCGA TGCCGGCGGC
AGCATGACGA AGACGGACCA CAAGGGGCAT TCCGGCCACT GA
 
Protein sequence
MNRLIRTFAS VAAVSLLSVA AVQAAEIKAG DLVITEAWSR ATPGGAKVAG GFLTIDNKGA 
AADRLVSATA DVAGKVEVHE MSMDNGVMKM RLLDKGLSIE PGKTVKLAPG GYHIMLLDLK
GPLKEGEKVP VTLQFEKAGK VPVTLDVAGV GAKAPGDAGG SMTKTDHKGH SGH