| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2865 |
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| Symbol | |
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| ID | 4023363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3193317 |
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| End bp | 3194636 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963063 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_569994 |
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| Protein GI | 91977335 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.287208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGT CGCGATTCTT CCTGCCGATC CTGAAGGAAA ACCCGAAGGA AGCCGAGATC
GTCTCGCACC GGCTGATGCT GCGCGCCGGG ATGCTGCGCC AGGAAGCCGC CGGCATCTAT
GCCTGGCTGC CGCTCGGTCA CCGGGTGCTG AAGAAGATCG AGCAGATCGT GCGCGAAGAG
CAGAACCGCG CCGGCGCGAT CGAGCTGCTG ATGCCGACGC TGCAGCTCGC CGATCTGTGG
CGCGAGAGCG GTCGCTACGA CGCCTATGGT CCGGAGATGC TGCGGATCGC CGATCGCCAC
AAGCGCGAGC TGCTGTACGG GCCGACCAAC GAGGAAATGA TCACCGAGAT CTTCCGCGCC
TACGTCAAGT CGTACAAGAG CCTGCCGCTC AACCTCTATC ACATCCAGTG GAAGTTCCGC
GACGAGCAGC GCCCGCGATT TGGCGTGATG CGCGGCCGCG AATTCCTGAT GAAGGACGCG
TATTCGTTCG ACGTCGACGA GGCCGCCGCG CGCAAGTCGT ATAATCGGAT GTTCGTCGCT
TATTTGCGGA CCTTTGCGCG GATGGGGCTG AAGGCGATTC CGATGCGCGC CGAGACCGGA
CCGATCGGCG GCGACCTCAG CCACGAATTC ATCGTGCTGG CCGAGACCGG CGAGTCCGGC
GTGTATTGCG ATCGCGACGT GCTGAACCTG CCGGTGCCGG GCGAGGACGT CGACTATGAT
GGCGATCTGA CGCCGATCAT CCAGCAGTGG ACCTCGGTCT ACGCCGCGAC AGAAGACGTG
CATGACGCGG CCCGCTACGA GAGCGAAGTG CCCGAGGCCA ACCGGCTCAA CACCCGCGGC
ATCGAGGTCG GCCAGATTTT CTATTTCGGC ACCAAATATT CCGACTCGAT GAAGGCCAAT
GTCGCCGGCC CCGACGGCGC CGATGCGCCG ATCCACGGCG GCTCCTACGG CGTCGGCGTG
TCGCGGCTGG TCGGCGCGAT CATCGAAGCC TGCCATGACG AGAACGGCAT CAAGTGGCCG
GAAGAGGTCG CGCCGTTCCG GGTTGCGATC CTCAACCTGA AGCAGGGCGA TGCCCAGACC
GATGCCGCGT GTGAGCAGCT TTATCGTGAG CTCGCGGCGA AGGGCGTCGA TGTGCTGTAT
GACGACACCG ACCAGCGCGC CGGCGCGAAG TTCGCGACCG CGGATCTGAT CGGCATTCCG
TGGCAGGTGC TGGTCGGGCC GAAGGGCCTG GCAGACGGCA AGGTCGAGCT GAAGCGTCGC
AGTGACGGCT CGCGCGAGAC GATCGCGTTG GCGGAGGCGG TCGCACGGCT TGCGCCGTAG
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| Protein sequence | MRLSRFFLPI LKENPKEAEI VSHRLMLRAG MLRQEAAGIY AWLPLGHRVL KKIEQIVREE
QNRAGAIELL MPTLQLADLW RESGRYDAYG PEMLRIADRH KRELLYGPTN EEMITEIFRA
YVKSYKSLPL NLYHIQWKFR DEQRPRFGVM RGREFLMKDA YSFDVDEAAA RKSYNRMFVA
YLRTFARMGL KAIPMRAETG PIGGDLSHEF IVLAETGESG VYCDRDVLNL PVPGEDVDYD
GDLTPIIQQW TSVYAATEDV HDAARYESEV PEANRLNTRG IEVGQIFYFG TKYSDSMKAN
VAGPDGADAP IHGGSYGVGV SRLVGAIIEA CHDENGIKWP EEVAPFRVAI LNLKQGDAQT
DAACEQLYRE LAAKGVDVLY DDTDQRAGAK FATADLIGIP WQVLVGPKGL ADGKVELKRR
SDGSRETIAL AEAVARLAP
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