| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2843 |
|---|
| Symbol | gltA |
|---|
| ID | 4023341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3168145 |
|---|
| End bp | 3169449 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637963041 |
|---|
| Product | type II citrate synthase |
|---|
| Protein accession | YP_569972 |
|---|
| Protein GI | 91977313 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.433784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.36225 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAA CGACAAACAA CAAGTCAGCA ACGCTTACGG TTGGAAACAA CGCTTACGAT
CTTCCCATTC TGACCGGAAC GGTGGGCCCC GATGTCGTCG ACATCGGCAA GCTTTACGCC
CAGGCGGGGT TGTTCACTTA CGACCCTGGT TTCACGTCGA CGGCGAGCTG CCAGTCCAAG
ATCACCTATA TCGACGGCGA TGCCGGCGTT CTCGAATATC GCGGCTATCC GATCGAGCAA
CTCGCCCAGC AGGGCGACTT CCTCGAGACC TGCTATCTTC TGCTGTACGG CGAACTGCCG
ACCAAGGCGC AGAAGGAAGA TTTCGACTAC CGGGTCACGC GCCACAACAT GGTGCACGAG
CAGATGGCCC GATTCTTCCA GGGCTTCCGC CGCGACGCGC ATCCGATGGC GGTGATGGTC
GCGTCGGTCG GCGCGCTGGC CGCGTTCTAT CACGACTCTA CCGACATCAA CGATCCGACC
CAGCGGATGA TCGCCTCGAT CCGGATGATC GCCAAGATCC CGACGCTGGC GGCGATGGCC
TACAAATACT CGGTCGGCCA GCCGTTCATG TACCCGAAGA ACTCGCTGAC CTTTGCCGGC
AATTTTCTGC ACATGTGCTT CGCCACACCT TGCGAGGAGT ACAAGGTCAA TCCGGTGCTG
GCGCAAGCTC TCGACAAGAT CTTCACGCTG CACGCCGATC ACGAGCAGAA CGCCTCGACC
TCGACGGTCC GCATCGCGGG CTCCTCCGGC GCCAACCCGT TCGCCTGCAT CGCTGCCGGC
ATCGCCTGTC TGTGGGGTCC GGCGCATGGC GGGGCCAACG AGGCTGCGCT GGCGATGCTG
AAGGAAATCG GCTCGGTCGA GAACATTCCC GACTTCATCG CGCGCGTGAA GGACAAGAAC
TCCACGGTGC GGCTGATGGG CTTCGGCCAC CGCGTCTACA AGAACTACGA TCCGCGCGCC
AAGATCATGC AGCAGACCTG CCATGAAGTG CTGGCCGAGA CCGGCCATCA CGGCGACCCG
CTGTTGAAGG TGGCGATGGA GCTCGAGAAG ATCGCGCTCA GCGACCAGTA CTTCATCGAC
CGCAAGCTGT ATCCCAACGT CGACTTCTAT TCGGGCATCA CCCTGAAGGC GATGGGCTTC
CCGACCGACA TGTTCACCGT GTTGTTCGCG GTGGCGCGCA CCGTCGGCTG GATCAGCCAG
TGGAGCGAGA TGATCGAGGA TCCGCAGCAG AAGATCGGCC GTCCGCGCCA GCTCTTCACC
GGCTCGCCGA GCCGCCAATA TGTCGCGATC GACAAGCGCG GCTGA
|
|---|
| Protein sequence | MDATTNNKSA TLTVGNNAYD LPILTGTVGP DVVDIGKLYA QAGLFTYDPG FTSTASCQSK
ITYIDGDAGV LEYRGYPIEQ LAQQGDFLET CYLLLYGELP TKAQKEDFDY RVTRHNMVHE
QMARFFQGFR RDAHPMAVMV ASVGALAAFY HDSTDINDPT QRMIASIRMI AKIPTLAAMA
YKYSVGQPFM YPKNSLTFAG NFLHMCFATP CEEYKVNPVL AQALDKIFTL HADHEQNAST
STVRIAGSSG ANPFACIAAG IACLWGPAHG GANEAALAML KEIGSVENIP DFIARVKDKN
STVRLMGFGH RVYKNYDPRA KIMQQTCHEV LAETGHHGDP LLKVAMELEK IALSDQYFID
RKLYPNVDFY SGITLKAMGF PTDMFTVLFA VARTVGWISQ WSEMIEDPQQ KIGRPRQLFT
GSPSRQYVAI DKRG
|
|---|
| |