| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2826 |
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| Symbol | |
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| ID | 4023324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3147935 |
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| End bp | 3148708 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963024 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_569955 |
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| Protein GI | 91977296 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.14857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGTCC CCGCCGTTCG TTCGCTGATT GCCGGAAACT GGAAGATGAA CGGCCTCAAG
GCCGCGTCGT CGGAGTTCGA CGCTATGCTG GAGGGCGCGA CCGAGCTGTC ATCGGGGATC
GATCTGCTGG TGTGCCCGCC GGCAACGCTG ATCGCCGCGT TTGCCGACAG GCTTGCCGCC
AACGAGAAGG GCGCGCTTGC GGTCGCGATC GGCGCCCAGG ATTGCCATGC CAACGCCACC
GGCGCCCATA CCGGCGACAT CTCGGCCGAA ATGCTGGCCG ACGCCGGCGC CCGCGCGATC
ATCGTCGGTC ATTCCGAGCG CCGCGCCGAT CACGGCGAGA CCGACGCGAT CGTCCGCACC
AAGGCGCAGG CGGCGTGGCG GGCCGGGCTG GTCGCGATCG TCTGCGTCGG CGAGACCCAG
GGCGAACGCA ATGCCGGGCA CACTCTGGAC GTTGTCGCCG GCCAGCTCGC CGGCTCGCTG
CCCGACGGCG CCACCGCCGC CAATCTGGTG GTGGCCTATG AGCCGGTCTG GGCGATCGGC
ACCGGCATGA CCCCGACCGC GGCTGATGTC GAGGAAGTTC ATGGCTTTAT TCGTCAGACT
CTGACGCAGC GCTTTAACGC CGAAGGCGAC CAGATGCGGC TGCTGTATGG CGGCTCGGTG
AAGCCCTCGA ATGCCCGCGA ACTGATGTCA GTCCCGCATG TCAACGGCGC GCTGGTCGGC
GGCGCCAGCC TGAAGGCGTC GGACTTCCTT GCGATTGCCG CCGGGTGTCC CTAA
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| Protein sequence | MPVPAVRSLI AGNWKMNGLK AASSEFDAML EGATELSSGI DLLVCPPATL IAAFADRLAA
NEKGALAVAI GAQDCHANAT GAHTGDISAE MLADAGARAI IVGHSERRAD HGETDAIVRT
KAQAAWRAGL VAIVCVGETQ GERNAGHTLD VVAGQLAGSL PDGATAANLV VAYEPVWAIG
TGMTPTAADV EEVHGFIRQT LTQRFNAEGD QMRLLYGGSV KPSNARELMS VPHVNGALVG
GASLKASDFL AIAAGCP
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