| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2819 |
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| Symbol | |
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| ID | 4023317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3140940 |
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| End bp | 3142166 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963017 |
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| Product | major facilitator transporter |
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| Protein accession | YP_569948 |
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| Protein GI | 91977289 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.601855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGG GCGGCGGGGC AGGCGTTCAG CCGGGCCTGC CGCCCGCGCT CAATATCATT
GCGCTGTCGG GCTTCGCGGC GAGCCTGTCG ACGCGTGCGC TCGACCCGGT GCTGCCGCGG
ATCGCCTACG AATTCTCGGT CTCGATCGCC ACCGCCGCCG GTCTCGCGGC AATCACCGCC
TTCACCTTCG CCATGGTGCA GCCGGCGATC GGCGCGCTCG CCGATCTGTT CGGCAAGGCG
CGGCTGATGA TCGTCTGCCT CGCGCTGCTC GGCTTCGCCA GCCTGCTTGG CGCGATGTCG
TCGTCGTTCG AGGTGCTGTT TCTGTGCCGG ATTCTCGCCG GCATCGGGGC GGGCGGGGTT
TTTCCGGTGG CGCTCGGGCT CACCGCCGAT CTGGTCGAGC CGGAGCGTCG GCAGGTCGCG
ATTGGACGCG TGCTCGGCGG CGCGATGACC GGGAATCTGC TCGGGGCCTC GGCCTCCGGC
GTGATCGGCG ACGTGCTCGG CTGGCGCGGC GTGCTGCTTG TGCTCGGCCT GCTGGTGATC
ATAGCCGCGC TGGCGGTGGC GTTCGGATTT CGCAACAAGC CGATGCGCCC AGGCGCGCCG
ATGGATCTGG CGTCGCTGCG TCGCGGCTAT CGCACCATCT TCAGCAATCC GAATGCGCTG
ATCTGCTTTG CCGCGGTGCT GGTCGAAGGC ACTTGCGTGA TGGGTGCGTT TCCCTATGTC
GCAGCGTTTC TGCACGAACT CGGGCAGGAG TCGCTCGCGA TCGCCGGGCT GGTGATCGCC
GGCTTCGCCG TTGGCGGGCT GCTCTACACG CTCACCGTGG GCCGGCTGCT GCCGCGGCTC
GGCGTCAACG GCATGATGAT CGGCGGCGGC GCGCTGGTCG GGCTTCAACT CGCGATCATC
GCCTTCGGGC CGCCGTGGCA GGCGCAGGCT TTGGCCTTCA TCGCGATGGG CATGGGCTTC
TACATGCTGC ACGGCTGCGT GCAGGTGTTC GCCAGCGAAC TCAGCGAGAC CGCGCGCGGC
ACCGCGATGT CGCTGCACTC GTTCTTCTTC TTCATTGGTC AGACCACCGG CCCGATCGCC
TATGGCTTCG GCCTCGCGCA TCTCGGCAAG ACGCCGACGA TGCTGATTGC CGGGGTGACG
ATGCTGGCGC TCGGCCTGAC ACTGGCCGCC CTGCTGCGGC CAAGGCCGCC GGGGGATGCA
GTGGGGACCG CCGAGCGGGC CAGCTAA
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| Protein sequence | MPQGGGAGVQ PGLPPALNII ALSGFAASLS TRALDPVLPR IAYEFSVSIA TAAGLAAITA
FTFAMVQPAI GALADLFGKA RLMIVCLALL GFASLLGAMS SSFEVLFLCR ILAGIGAGGV
FPVALGLTAD LVEPERRQVA IGRVLGGAMT GNLLGASASG VIGDVLGWRG VLLVLGLLVI
IAALAVAFGF RNKPMRPGAP MDLASLRRGY RTIFSNPNAL ICFAAVLVEG TCVMGAFPYV
AAFLHELGQE SLAIAGLVIA GFAVGGLLYT LTVGRLLPRL GVNGMMIGGG ALVGLQLAII
AFGPPWQAQA LAFIAMGMGF YMLHGCVQVF ASELSETARG TAMSLHSFFF FIGQTTGPIA
YGFGLAHLGK TPTMLIAGVT MLALGLTLAA LLRPRPPGDA VGTAERAS
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