Gene RPD_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2817 
Symbol 
ID4023315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3138629 
End bp3139105 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID637963015 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_569946 
Protein GI91977287 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.153581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.448053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAT CACCCCGCAA AACGCCGAAA TCCCCTTCCC TGCAGCTCGG CCAGGCGGTC 
GAATGGCCGG CCACGCCGGA CGCGGCCAGG CTCGACCGCG TGCCCAATCC ACAAGCCGGC
ACCGATTATC TGGTGCGGTT CACCGCGCCG GAATTCACCT CGTTGTGCCC GGTCACCGGC
CAGCCTGATT TCGCCCATCT GGTGATCGAC TACGCGCCCG GCGCCTGGCT GGTGGAGTCC
AAATCGCTGA AGCTGTATCT CGCCAGCTTC CGCAACCATG GCGGCTTTCA CGAGGACTGC
ACGGTGTCGA TCGGCAAGCG GATCGCGGCC GAGATCAAGC CGAAATGGCT GCGCATCGGC
GGCTATTGGT ATCCGCGCGG CGGCATTCCG ATCGACGTGT TCTGGCAGAC CGGCAAACTG
CCGAAGGGCA TGTGGGTGCC TGATCAGGGC GTCGCGCCGT ATCGCGGGCG GGGCTGA
 
Protein sequence
MSRSPRKTPK SPSLQLGQAV EWPATPDAAR LDRVPNPQAG TDYLVRFTAP EFTSLCPVTG 
QPDFAHLVID YAPGAWLVES KSLKLYLASF RNHGGFHEDC TVSIGKRIAA EIKPKWLRIG
GYWYPRGGIP IDVFWQTGKL PKGMWVPDQG VAPYRGRG