| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2812 |
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| Symbol | |
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| ID | 4023310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3133617 |
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| End bp | 3134651 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963010 |
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| Product | pyruvate dehydrogenase (lipoamide) |
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| Protein accession | YP_569941 |
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| Protein GI | 91977282 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0707422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAC CAAAAAAGAG CGCCGCGAAA GAGACGGGGC AGGACAGGAA CTCCGGACCG
ACCAAGTCGA AGGTCCCGGA CTTCACCAAG GAGCAGGAGC TGCACGCGTT CCGCGACATG
CTGCTGATCC GCCGCTTCGA AGAGAAAGCC GGTCAGCTCT ACGGCATGGG TGCGATCGGC
GGCTTCTGCC ATCTCTACAT CGGCCAGGAA GCCGTCGTCG TCGGGATGCA GATGGCGTTG
CGCGAAGGTG ATCAGGTCAT CACCGGCTAT CGCGACCACG GCCACATGCT CGCCTGCGAG
ATGGACGCCA AGGGCGTGAT GGCGGAGCTG ACCGGACGCC GCGGCGGCTA CTCCAAGGGC
AAGGGCGGCT CCATGCACAT GTTCAGCATG GAGAAGCACT TCTACGGCGG CCACGGCATC
GTCGGCGCGC AGGTCTCGCT CGGCACCGGC ATCGCCTTCG CCAACCGCTA TCGCGACAAT
GGCAGCGTCT GCCTCGCTTA TTTCGGCGAC GGCGCGTCCA ATCAGGGCCA GGTCTACGAG
AGCTTCAACA TGGCGGAGCT GTGGAAGCTC CCGGTGGTCT ACGTCATCGA GAACAACCGC
TACGCGATGG GCACCTCGGT GACACGCTCC TCGGCGCAGA CCGACTTTTC CAAGCGCGGC
GTCTCGTTCA ACATTCCCGG CGAGCAGGTC GACGGCATGG ACGTCCGTGC GGTGAAAGCC
GCCGGCGACA AGGCGGTGGC GCATTGCCGC GCCGGCAATG GACCCTACAT CCTCGAGATG
CAGACCTATC GCTATCGCGG CCACTCGATG TCCGATCCCG CGAAGTACCG GACCCGCGAG
GAGGTCGACA AGATCCGCAA CGATCAGGAT CCGATCGAAC AGGTGCGCCA GCGTCTGCTC
GGCTCGGACA TGACCGAGGA CGATCTCAAG AAGATCGACG CCGAGGTGCG CAAGATCGTC
AACGAGGCGG CCGACTTCGC GCAGAACGAT CCCGAGCCCG ACCCGTCCGA ACTCTACACC
GATGTCTATC GCTGA
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| Protein sequence | MAAPKKSAAK ETGQDRNSGP TKSKVPDFTK EQELHAFRDM LLIRRFEEKA GQLYGMGAIG
GFCHLYIGQE AVVVGMQMAL REGDQVITGY RDHGHMLACE MDAKGVMAEL TGRRGGYSKG
KGGSMHMFSM EKHFYGGHGI VGAQVSLGTG IAFANRYRDN GSVCLAYFGD GASNQGQVYE
SFNMAELWKL PVVYVIENNR YAMGTSVTRS SAQTDFSKRG VSFNIPGEQV DGMDVRAVKA
AGDKAVAHCR AGNGPYILEM QTYRYRGHSM SDPAKYRTRE EVDKIRNDQD PIEQVRQRLL
GSDMTEDDLK KIDAEVRKIV NEAADFAQND PEPDPSELYT DVYR
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