| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2811 |
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| Symbol | |
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| ID | 4023309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3132132 |
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| End bp | 3133541 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963009 |
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| Product | pyruvate dehydrogenase subunit beta |
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| Protein accession | YP_569940 |
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| Protein GI | 91977281 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.344502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.77685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATTC AAGTTCTGAT GCCCGCGCTG TCGCCGACCA TGGAGAAGGG TAACCTTTCG
AAATGGCTGA AGAAGGAAGG CGACAAGGTC AAAAGCGGCG ACGTGATCGC GGAGATCGAG
ACCGACAAGG CGACGATGGA AGTCGAGGCC GCCGATGAAG GCACGCTCGG CAAGATCCTG
ATCCCCGAAG GCACCAACGA CGTCGCGGTC AACACCCCGA TCGCCACCAT CCTCGGCGAC
GGCGAGAGCG CCTCGGACGC CGACAAGGCC GCCGAACCTG CGGCGCAGAA CAAGAGCGCG
CAATCGGCGC CGCCGGCTGC CGCGCCGGAA GCCGGCGAGG CGAAGTCCGC ACCCGTGCCC
GCGCAGGACG CTCCGGAAGC GCCGGCTGTG TCGGTGGCTG ACGATCCCGA CATTCCCGCC
GGCACCGAGA TGGTCACCGT CACCATCCGC GAAGCGCTGC GCGACGCGAT GGCCGAGGAG
ATGCGGCGCG ATCCCGACGT GTTCGTGATG GGCGAAGAGG TCGCCGAGTA TCAGGGTGCC
TATAAGGTGA CGCAGGGTCT GCTGCAGGAA TTCGGCGCGC GCCGCGTGAT CGACACGCCG
ATCACCGAGC ACGGCTTCGC CGGCGTCGGC GTCGGCGCGG CGATGACGGG GCTGAAGCCG
ATCGTCGAAT TCATGACCTT CAACTTCGCG ATGCAGGCGA TCGACCAGAT CATCAACTCC
GCCGCCAAGA CGCTGTACAT GTCCGGCGGC CAGCTCGGCT GTTCGATCGT GTTCCGCGGC
CCGAACGGCG CGGCGTCGCG CGTCGCCGCC CAGCACAGCC AGGACTACTC GTCCTGGTAC
GCGCAGATCC CCGGCCTCAA GGTGGTCGCG CCGTCGACCG CCGCGGACTA CAAGGGCCTG
CTCAAGGCCG CGATCCGCGA TCCCAATCCG GTGATCTTCC TCGAACACGA GATGATGTAC
GGGCAATCCG GCGAAGTGCC GAAGCTCGAC GACTACGTGA TCCCGATCGG CAAGGCGCGG
GTCGCGCGGC AGGGCCAGCA CGTCACGCTG ATTTCGTGGT CGCACGGCAT GAGCTACGCG
CTGAAAGCCG CCGAGGAACT CGCCAAGGAC GGCATCGAGG CCGAAGTGAT CGATTTGCGC
ACGTTGCGGC CGCTCGACAC CGAGACGATC ATCGCATCGG TGAAGAAGAC CGGCCGCGCT
GTCGCGATCG AGGAGGGCTG GCAGCAGAAC GGCGTCGGCG CCGAGATCGC AGCCAGGATC
ATGGAGCACG CGTTCGACTA TCTGGACGCG CCGGTGGCGC GCGTCTCGGG CAAGGACGTG
CCGATGCCCT ATGCGGCCAA TCTGGAGAAG CTGGCGCTGC CCAGCGTCGC CGAAGTCGTC
GAGGCGGCCA AAGCCGTCTG CTATCGGTAG
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| Protein sequence | MPIQVLMPAL SPTMEKGNLS KWLKKEGDKV KSGDVIAEIE TDKATMEVEA ADEGTLGKIL
IPEGTNDVAV NTPIATILGD GESASDADKA AEPAAQNKSA QSAPPAAAPE AGEAKSAPVP
AQDAPEAPAV SVADDPDIPA GTEMVTVTIR EALRDAMAEE MRRDPDVFVM GEEVAEYQGA
YKVTQGLLQE FGARRVIDTP ITEHGFAGVG VGAAMTGLKP IVEFMTFNFA MQAIDQIINS
AAKTLYMSGG QLGCSIVFRG PNGAASRVAA QHSQDYSSWY AQIPGLKVVA PSTAADYKGL
LKAAIRDPNP VIFLEHEMMY GQSGEVPKLD DYVIPIGKAR VARQGQHVTL ISWSHGMSYA
LKAAEELAKD GIEAEVIDLR TLRPLDTETI IASVKKTGRA VAIEEGWQQN GVGAEIAARI
MEHAFDYLDA PVARVSGKDV PMPYAANLEK LALPSVAEVV EAAKAVCYR
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