| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2809 |
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| Symbol | |
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| ID | 4023307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3130398 |
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| End bp | 3131819 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963007 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_569938 |
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| Protein GI | 91977279 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.781308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA ACATCCTGAT GCCCGCGCTC TCGCCGACCA TGGAGAAGGG CAACCTTGCG
AAGTGGCTGA AAAAGGAGGG CGACAAGGTC AAGAGCGGCG ACGTCATCGC CGAGATCGAG
ACCGACAAGG CGACGATGGA AGTCGAGGCC TCCGACGAGG GGACGCTGGC GAAGATCCTC
GTCCCGGAAG GAACCCAGGA TGTCGCGGTC AATGCCGTGA TCGCCGTGCT CGCCGGCGAC
GGCGAGGACG TCGAGGCGGC CGGGGCAGGG GCCGGCAAGG CGGAGGCGCC GAAGGCTGAG
GCTGCAAAGG CCGAGGACGT GAAGAAGCCC GCGGCGTCAT CCGTCGAGAC GACCGCTGCG
CGGGCTCCTC AGGATGACGG CGGCGCGGCT GGCAAGGGCG CTGCAGATGC TGCCCCTCGG
CCTGCGGAAG GCGCGAAAGC GCCCGGCTCG AAGGGCGACG CCATGCGGGC CAAACCCGCG
CAATCCAGCG ACGCCCGGGT GTTCTCCTCG CCGCTGGCGC GGCGGCTCGC CAAGGATGCC
GGCATTGATC TGGCGCGTGT CGAGGGCACT GGCCCGCACG GCCGGGTGAT CGCCCGCGAC
GTCGAGCAGG CGAAGGCGGG AGGCGGACTG AAGGCGCCCG CGGCGGCGGC ATCGTCCGCT
GCGCCGGCGG TCGCGCCGTC GATGTCGGAC CAGCAGATCC GCGCGCTGTA TCCGGAGGGC
AGCTACGAGG CCGTGCCGCA CGACGGGATG CGGCGGACGA TTGCGCAGAG GCTGACGCAA
TCGACCCAGA CCATCCCGCA TTTCTACCTG ACGATCGACT GCAACCTCGA TCGGCTGATG
GCGGCGCGCG AAGATATCAA CGCCGCCGCG CCGAAGGACA AGGACGGCAA GCCGGCCTAC
AAGCTGTCGG TCAACGACTT CGTCATCAAG GCGATGGCGG TGGCGCTGCA GCGCATTCCC
GACGCCAATG TGTCGTGGAC GGAAGCCGGT ATGCTCAAGC ACAGGCATTC CGACATCGGC
GTCGCGGTGG CGATGCCGGG CGGATTGATC ACCCCGATCA TCCGCAGCGC CGAGACGGCG
TCGCTGTCGG CGATCTCCAA GCAGATGAAG GATTTCGCAG CCCGCGCCCG CGCGCGAAAA
CTGAAGCCGG ACGAGTATCA GGGCGGCACC ACGGCGATCT CCAACCTCGG CATGTACGGC
ATCAAGGACT TCACCGCGGT AATCAACCCG CCGCACGCCA CCATCCTGGC GGTCGGCGCC
GGCGAGCAGC GCCCGATCGT CCGGGACGGC AAGATCGAGA TCGCGACGAT GATGAGCGTG
ACGCTGAGTT GCGATCACCG CGCCGTCGAC GGCGCGCTCG GCGCCGAACT GATCGGCGCG
TTCAAGACGC TGATCGAAAA TCCCGTGATG ATGATGGTGT AG
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| Protein sequence | MPINILMPAL SPTMEKGNLA KWLKKEGDKV KSGDVIAEIE TDKATMEVEA SDEGTLAKIL
VPEGTQDVAV NAVIAVLAGD GEDVEAAGAG AGKAEAPKAE AAKAEDVKKP AASSVETTAA
RAPQDDGGAA GKGAADAAPR PAEGAKAPGS KGDAMRAKPA QSSDARVFSS PLARRLAKDA
GIDLARVEGT GPHGRVIARD VEQAKAGGGL KAPAAAASSA APAVAPSMSD QQIRALYPEG
SYEAVPHDGM RRTIAQRLTQ STQTIPHFYL TIDCNLDRLM AAREDINAAA PKDKDGKPAY
KLSVNDFVIK AMAVALQRIP DANVSWTEAG MLKHRHSDIG VAVAMPGGLI TPIIRSAETA
SLSAISKQMK DFAARARARK LKPDEYQGGT TAISNLGMYG IKDFTAVINP PHATILAVGA
GEQRPIVRDG KIEIATMMSV TLSCDHRAVD GALGAELIGA FKTLIENPVM MMV
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