| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2806 |
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| Symbol | |
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| ID | 4023304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3126518 |
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| End bp | 3128242 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963004 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_569935 |
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| Protein GI | 91977276 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.852293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA AGGCGACGCT CAAGTCGAAG CTCCCCAGCC GGCACGTGAC CGAAGGGCCG
GCGCGCGCGC CCCATCGCTC TTACCTCTAC GCCATGGGCC TCACCACCGA GCAGATCCAC
CAGCCGTTCG TCGGGGTGGC GTCGTGCTGG AACGAGGCCG CGCCCTGCAA CATTTCGCTG
ATGCGGCAGG CTCAGGCGGT CAAGAAGGGC GTCGCCTCCG CCGGCGGCAC CCCGCGCGAA
TTCTGCACCA TCACCGTGAC TGACGGCATC GCCATGGGCC ACGAGGGCAT GCGCTCGTCG
CTGCCGTCGC GCGAGGTGAT CGCCGACTCC GTCGAGCTGA CAATCCGCGG CCACTCCTAT
GACGCGCTGG TCGGGCTGGC CGGCTGCGAC AAGTCTCTGC CCGGGATGAT GATGGCGATG
GTCCGGCTCA ACGTGCCGTC GATCTTCATC TATGGCGGCT CGATCCTGCC GGGCACCTTC
CGGGGCCAGC AGGTCACCGT TCAGGACATG TTCGAGGCGG TCGGCAAGCA CTCGGTCGGC
GAGATGTCGG ACGACGACCT CGACGAAATC GAGCGGGTCG CCTGTCCGTC GGCCGGCGCC
TGCGGCGCGC AGTTCACCGC CAACACCATG GCGACCGTGT CCGAGGCGAT CGGCCTAGCG
CTGCCGTATT CGGCCGGCGC ACCTGCTCCT TACGAAATCC GCGATGCGTT CTGCACGGCG
GCCGGCGAGA AGGTGATGGA GCTGATCGCC GCCAACATCC GGCCGCGCGA CATCGTCACC
CGCAAGGCGC TGGAGAATGC GGCCGCGGTG GTAGCAGCGT CCGGCGGCTC GACCAATGCT
GCGCTGCACC TACCAGCGAT CGCGCATGAA TGTGGTATCA AGTTCGATCT GTTTGATGTC
GCCGAAATCT TCAAAAAGAC ACCATATATC GCGGATTTGA AGCCAGGCGG CCGTTATGTC
GCCAAAGACA TGTATGAAGT TGGCGGCATA CCGCTCCTGA TGAAGACCCT GCTCGATCAT
GGCTTCCTCC ACGGCGACTG CCTGACCGTC ACGGGACGGA CGATCGCCGA GAATCTGAAA
GCCGTGAAGT GGAATCCGCA TCAGGACGTG GTGCGGCAGG CGAACCATCC GATCACCGTG
ACTGGGGGCG TCGTCGGGCT GAAGGGAAAC CTCGCACCAG AAGGTGCGAT CGTGAAGGTC
GCGGGAATGT CGAACCTGAA GTTTTCCGGG CCTGCCCGCT GCTTCGATCG CGAGGAAGAC
GCGTTCGAGG CGGTGCAGAA GCGGACCTAC AAGGAAGGCG AGGTCCTCGT GATCCGCTAC
GAGGGGCCGC GGGGCGGCCC CGGAATGCGG GAAATGCTCG CCACCACTGC GGCGCTGACC
GGCCAGGGCA TGGGCGGCAA GATCGCGCTG ATCACCGACG GCCGGTTCTC CGGCGCCACC
CGCGGCTTCT GCATCGGCCA TGTCGGCCCG GAAGCGGCGC TGGGTGGTCC GATCGCGCTG
CTGCGCGACG GTGACATCAT CGTCATCGAC GCCGAGGCCG GAACGCTTGA CGTAAATTTG
ACCGACGACG AACTGGCCGC GCGCAAGTCC GAATGGGCGC ATCGCGCGAC AAACCACACG
TCGGGTGCGC TTTGGAAATA TGCCCAGCAG GTCGGGCCCG CAGTCAGCGG CGCTGTGACT
CATCCGGGCG GGGCGGCCGA GAAGCAGTGC TATGCGGATG TTTGA
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| Protein sequence | MDAKATLKSK LPSRHVTEGP ARAPHRSYLY AMGLTTEQIH QPFVGVASCW NEAAPCNISL
MRQAQAVKKG VASAGGTPRE FCTITVTDGI AMGHEGMRSS LPSREVIADS VELTIRGHSY
DALVGLAGCD KSLPGMMMAM VRLNVPSIFI YGGSILPGTF RGQQVTVQDM FEAVGKHSVG
EMSDDDLDEI ERVACPSAGA CGAQFTANTM ATVSEAIGLA LPYSAGAPAP YEIRDAFCTA
AGEKVMELIA ANIRPRDIVT RKALENAAAV VAASGGSTNA ALHLPAIAHE CGIKFDLFDV
AEIFKKTPYI ADLKPGGRYV AKDMYEVGGI PLLMKTLLDH GFLHGDCLTV TGRTIAENLK
AVKWNPHQDV VRQANHPITV TGGVVGLKGN LAPEGAIVKV AGMSNLKFSG PARCFDREED
AFEAVQKRTY KEGEVLVIRY EGPRGGPGMR EMLATTAALT GQGMGGKIAL ITDGRFSGAT
RGFCIGHVGP EAALGGPIAL LRDGDIIVID AEAGTLDVNL TDDELAARKS EWAHRATNHT
SGALWKYAQQ VGPAVSGAVT HPGGAAEKQC YADV
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