| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2804 |
|---|
| Symbol | |
|---|
| ID | 4023302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3124760 |
|---|
| End bp | 3125551 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637963002 |
|---|
| Product | exodeoxyribonuclease III |
|---|
| Protein accession | YP_569933 |
|---|
| Protein GI | 91977274 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.96481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.323562 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATAG CCACCTGGAA CGTGAACTCG GTCAGGCAGC GGATCGATCA TCTGGTGAGC
TGGCTGAAGG CGTGCGAGCC GGACGTGGTC TGCCTGCAGG AGATCAAATG CGTCGACGAG
GCCTTCCCGC GCGAGCCGAT CGAGGCGCTC GGCTACAACA TCGTCACCCA CGGCCAGAAA
ACCTTCAACG GCGTCGCGCT GCTCTCCAAA TATCCGCTCG AGGAAGCCAC CCCGCGTCTG
GCCGGTGACG AGACCGACGT CCACGCCCGA TTCCTCGAAG GCGTGGTGTC GCTGAAGCGC
GGCGTGGTCC GCGTCGCCTG CCTCTATCTG CCCAATGGTA ACCCGGTCGA AACCGAGAAA
TATCCTTACA AGCTCAGTTG GATGTCGCGG CTTCTTCAGT ATTCAAAGGA ACGACTGAAG
ACCGAGGAGC CGCTGATCCT GGCCGGCGAC TTTAACGTCA TCCCGCAGGC CTCCGACGTC
TACAATCCAG CGGGTTGGGT CGACGATGCG CTGTTCCGGC CGCAGACCCG CGAGAGCTTC
CAGGCCCTGC TCGGCCTTGG CCTCACCGAC GCCCTGCGCG CCACCACCGA CGCCCCGGGT
CAGTACACTT TCTGGGACTA TCAGGCCGGC GCCTGGCAGA AGAATTGGGG CATCCGCATC
GACCACCTGC TGCTGTCGCC GCAGGCCACC GACCGGTTGG TCGGGGTCGG AATCGATAGC
CACGTTCGCA GCTGGGAGAA GCCGTCGGAC CATGTGCCGG TGTGGGCGGA CTTCGATTTC
GAAACCGCCT GA
|
|---|
| Protein sequence | MRIATWNVNS VRQRIDHLVS WLKACEPDVV CLQEIKCVDE AFPREPIEAL GYNIVTHGQK
TFNGVALLSK YPLEEATPRL AGDETDVHAR FLEGVVSLKR GVVRVACLYL PNGNPVETEK
YPYKLSWMSR LLQYSKERLK TEEPLILAGD FNVIPQASDV YNPAGWVDDA LFRPQTRESF
QALLGLGLTD ALRATTDAPG QYTFWDYQAG AWQKNWGIRI DHLLLSPQAT DRLVGVGIDS
HVRSWEKPSD HVPVWADFDF ETA
|
|---|
| |