| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2796 |
|---|
| Symbol | |
|---|
| ID | 4023294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3114471 |
|---|
| End bp | 3115685 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637962994 |
|---|
| Product | deoxyguanosinetriphosphate triphosphohydrolase |
|---|
| Protein accession | YP_569925 |
|---|
| Protein GI | 91977266 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0211174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.07254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGTCG GAATGGCAGC TCCTCGCGCA GCCTATGGTT GCGATCCGGA CCGCAGCCGC
GGCCGGCAGT TCGCCGAGCC GCCGAGCAAC AACCGCAGTG CTTTTCGGCG TGATTGCGAC
CGGGTGATCC ACTCCAACGC CTTCCGCCGG CTCAAGCACA AGACCCAGGT CTTCGTGTTC
CACGAGGGCG ATCATTACCG CACCCGTCTG ACCCACAGCC TCGAAGTCGC CCAGATCGCC
CGGGCGATCG CGCGCCAGCT CGGGCTCGAC GAGGACCTGA CCGAGACGCT GGCGCTGGCG
CACGATCTCG GCCACCCGCC GTTCGGCCAT GCCGGCGAGC GCGCGCTCGA CGCCTGCCTG
CGCGCCCATG GCGGCTTCGA TCACAACGCT CAGACCCTGC GGGTGCTGAC CGCACTCGAA
CACCGCTATC CGGAATTCGA CGGGTTGAAC CTGACCTGGG AAACGCTCGA AGGCGTGGTC
AAGCATAATG GCCCGCTCAC CGATCGCGCC GGCCGGCCGC TGCCGCGCTA CGCCGAGCGC
GGCGTGCCGA TCGGGATTGT CGAGTTCAGC CAGCGCTTCG ACCTCGAGCT GTGGAGCTTT
GCCTCGCTCG AGGCCCAGGT TGCGGCGATT GCCGACGACA TCGCCTACGA CGCCCACGAC
ATCGACGACG GGCTGCGCGC CGGGCTGTTC CGGGTCGACG ATCTGCGCGC CGTGCCGCTG
ACCGCATCGA TCATCGACGG CATCGCACGG CGCTATCCGG CTCTCGACGA AAGCCGGCGC
GGCGCCGAGC TGGTGCGCGA GCTGATCTCG CATTTGATCG GCGCGGTGAC CGCCGAGACC
ATGCGGCGAC TGGGCGAGGC TGCGCCGCGC TCGGCCGAGG AGGTGCGTCA CGCCAGTTCG
GCGATGGTGG CGTTCCCGAT CGAGACGGCC GCCGCGGAAG CCGAGATCAA GGCATTCCTC
TGGACCCACA TGTATCGGGC AAACCGCGTC ATGGCGGTGA TGCGCGACGC CGAGGCGATC
GTCGCCGACC TGTTCCAGCG CTATTGCGAC CATCCGGCCG ATCTGCCGCC GGACTGGCTG
CCGACCGATG GGCCGGTCGC CGAGTGCGAA GCGGACCGGC TGCGACGGAT CCGCAATTTC
ATCGCCGGCA TGACCGACCG CTATGCGCTG ACCGAACACC AGCGGCTTTT TGACTCGACT
CCGGATTTGC GTTAG
|
|---|
| Protein sequence | MSVGMAAPRA AYGCDPDRSR GRQFAEPPSN NRSAFRRDCD RVIHSNAFRR LKHKTQVFVF
HEGDHYRTRL THSLEVAQIA RAIARQLGLD EDLTETLALA HDLGHPPFGH AGERALDACL
RAHGGFDHNA QTLRVLTALE HRYPEFDGLN LTWETLEGVV KHNGPLTDRA GRPLPRYAER
GVPIGIVEFS QRFDLELWSF ASLEAQVAAI ADDIAYDAHD IDDGLRAGLF RVDDLRAVPL
TASIIDGIAR RYPALDESRR GAELVRELIS HLIGAVTAET MRRLGEAAPR SAEEVRHASS
AMVAFPIETA AAEAEIKAFL WTHMYRANRV MAVMRDAEAI VADLFQRYCD HPADLPPDWL
PTDGPVAECE ADRLRRIRNF IAGMTDRYAL TEHQRLFDST PDLR
|
|---|
| |