Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2795 |
Symbol | argS |
ID | 4023293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3112629 |
End bp | 3114422 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962993 |
Product | arginyl-tRNA synthetase |
Protein accession | YP_569924 |
Protein GI | 91977265 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0018] Arginyl-tRNA synthetase |
TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0417013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0873054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGATC AACCGATCTC GACGCATCTT TTCGCCCATG TCCTCGCGCG CGTGCACGCC GTCTGCGCCG TGCTGACCGA CGAGGGCGTG CTGCCCGCGG GGATCAATCT CGCGCGCATC GTGGTCGAAC CGCCGAAGGA CGCCTCGCAT GGCGACATGG CGACCAACGC CGCGATGGTG CTGGCGAAGG ACGCCAAGGC GAAGCCGCGC GATCTCGCCA ACAAGATCGC CGAGAAGCTT CGGGCCGAGG ACCAGATCGC CGAGGTCGCG ATCGCCGGTC CCGGCTTCAT CAATCTGACC CTGAAGCCGG CGGTGTGGGC GCAGGCGCTG CGCGCGGTGC TCGACGAGGG CTCCGCCTAC GGCCGCAGCC GGGTCGGCGG ATCCGAGAAG GTCAACGTCG AATACGTCTC CGCCAATCCG ACCGGGCCGA TGCATGTCGG CCATTGCCGC GGCGCGGTGT TCGGCGACGC GCTGGCGAAT TTGCTCGACG CGGCAGGCTA CGACGTCACC CGCGAGTACT ATATCAACGA CGCCGGCGCC CAGGTCGACG TGCTGGCGCG CTCCGCATTC CTGCGCTACC GCGAGGCGCT CGGCGAAGAC ATCGGCGCCA TTCCGGACGG GCTCTATCCG GGCGACTATC TGGTCCCGGT CGGCGCAGAG CTGGCTGCCG AGCACGGCTC GGCGTTGAAA GAAATGCCTG ATTCGCAATG GCTTCCGTTG GTACGCGCGA AGTCGATCGC GATGATGATG GAGATGATCA AAGGCGATCT CGCCGCGCTT GCGATCACCC ACGAAGTGTT TTTCTCGGAG CGTTCGCTGA TCGAGGGCGA TCGCAATCGC GTCGCCGACA CGATCGATTT TCTCCGCGCC AAGGGCGACG TCTATCAGGG CCGGTTGCCG CCGCCGAAGG GCGCGCCGGT CGAGGACTAT GAGGACCGCG AGCAGACCCT GTTCCGCGCC ACCGCCTATG GCGACGACGT CGATCGTCCG CTGCTGAAGT CCGACGGCTC CTACACTTAC TTCGCCTCCG ACATCGCCTA TCACAAGGTG AAGTTCGACG CCGGCTTCGG CAATATGGTC GACGTCTGGG GCGCCGACCA TGGCGGCTAC ATCAAGCGGA TGCAGGCGGC GATCACCGCG GTGACCGAAG GCAAGGGCGC GCTCGACGTC AAGATCGTCC AGCTCGTCCG GCTGCTGCGC AACGGCGAGC CGGTGAAGAT GTCGAAGCGG GCCGGCGACT TCGTCACGCT GCGCGAGGTG GTCGACGAGG TCGGTTCCGA CGCCGTCCGC TTCATGATGC TGTTCCGCAA GAACGACGCG GTGCTCGATT TCGACCTCGC CAAGGTGATC GAGCAGTCGA AGGACAATCC GGTATTCTAC GTCCAGTACG GCCATGCCCG CGGCCATTCG ATCTTCCGCA ACGCCCGGGA GGCGTTCCCG GACCTGCCGG AATCGACCGA CGCCCGGATC GCGTTCCTGA AGGATGCCAA GACGGAGCGG CTGACCGACC CGGCGGAGCT CGATCTGCTG CGGCGGCTGG CGCTGTTCCC GCGCACCGTG GAGGCCGCGG CGCTGGCCCA TGAGCCGCAC CGGGTCGCCT TCTATCTGTA TGATCTCGCC AGCGAATTTC ACGCGCTCTG GACGCGCGGG CGCGATTTGC CTCATTTACG CTTCATTATC AATAATGATG CAGAGATTAC CAAGGCGCGA CTGGCGATGG TCCAGGGCGT CGTCTCGGTT CTGGCATCTG GGCTTGCCAT GCTCGGCGTC ACAGCGCCGG ACGAGATGCG GTAG
|
Protein sequence | MPDQPISTHL FAHVLARVHA VCAVLTDEGV LPAGINLARI VVEPPKDASH GDMATNAAMV LAKDAKAKPR DLANKIAEKL RAEDQIAEVA IAGPGFINLT LKPAVWAQAL RAVLDEGSAY GRSRVGGSEK VNVEYVSANP TGPMHVGHCR GAVFGDALAN LLDAAGYDVT REYYINDAGA QVDVLARSAF LRYREALGED IGAIPDGLYP GDYLVPVGAE LAAEHGSALK EMPDSQWLPL VRAKSIAMMM EMIKGDLAAL AITHEVFFSE RSLIEGDRNR VADTIDFLRA KGDVYQGRLP PPKGAPVEDY EDREQTLFRA TAYGDDVDRP LLKSDGSYTY FASDIAYHKV KFDAGFGNMV DVWGADHGGY IKRMQAAITA VTEGKGALDV KIVQLVRLLR NGEPVKMSKR AGDFVTLREV VDEVGSDAVR FMMLFRKNDA VLDFDLAKVI EQSKDNPVFY VQYGHARGHS IFRNAREAFP DLPESTDARI AFLKDAKTER LTDPAELDLL RRLALFPRTV EAAALAHEPH RVAFYLYDLA SEFHALWTRG RDLPHLRFII NNDAEITKAR LAMVQGVVSV LASGLAMLGV TAPDEMR
|
| |