Gene RPD_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2792 
Symbol 
ID4023290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3109016 
End bp3109849 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID637962990 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_569921 
Protein GI91977262 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0379741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0326469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG AAATTCTGTC GTTTGAAACC GGGCGGCCTG CTGAGCAGGT CGAACAGGAA 
GACGCGCTCG TCATCGACGT CGAGGGCTAT GAAGGTCCGC TCGATCTGCT GCTGACACTT
GCCCGGCAGC AAAAGGTCGA CCTGCACAAG ATTTCGATCC TGGCGCTCGC CGACCAGTAT
CTGCAGTTCA TCGAGGAAGC GCGCAAAATT CGCCTCGAAC TGGCTGCCGA CTATCTGGTG
ATGGCGGCGT GGCTGGCGTT TCTGAAGTCG CGCCTGCTGT TGCCGGAGCC GCCGGCGGCG
GAAGGCCCGA GCGCCGAGGA GATGGCGACC GCGCTCGCCA ACCGGCTGCG CCGGCTGGAA
GCGATCCGCG AAGCAGCGGA CCGGCTGATG ACGCGGCCGC AATTGCAGCG CGATATCTTT
CCGCGCGGCA TGGCGGAAGC GATCGACGAG GTCCGGCATC CGAGATTCAC CGCGACGCTC
TACGATCTGC TCAGCGCCTA CGCGACGCAG CGCCAGTCGC GCGTGCTCGC GAGCGTGCAT
TTGGCGCGGC GCACGGTCTG GTCTTTGAGC GAGGCGCGCG CGTCGCTGGA GCGTCTGGTC
GGCCTTGCCG AAGACTGGAG CCGGCTCGAC GAATATCTGC TCCGCTACCT GGCCGATCCG
ACGCAGAAGG CGACGGTGCT GGCGTCGAGT TTCGCCGCGG CGCTCGAACT CGTGCGTGAG
GGCGAGGTCG AACTGCATCA GGCCGGGCCT CTGGCGCCTT TGTATTTTCG TAAGCGTCCG
CCGTCTCCAG CGATGGAAAC GGCAGCCGTG TCGGAAGTTC CGGCAGGGCA GTGA
 
Protein sequence
MTAEILSFET GRPAEQVEQE DALVIDVEGY EGPLDLLLTL ARQQKVDLHK ISILALADQY 
LQFIEEARKI RLELAADYLV MAAWLAFLKS RLLLPEPPAA EGPSAEEMAT ALANRLRRLE
AIREAADRLM TRPQLQRDIF PRGMAEAIDE VRHPRFTATL YDLLSAYATQ RQSRVLASVH
LARRTVWSLS EARASLERLV GLAEDWSRLD EYLLRYLADP TQKATVLASS FAAALELVRE
GEVELHQAGP LAPLYFRKRP PSPAMETAAV SEVPAGQ