| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2787 |
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| Symbol | |
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| ID | 4023285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3104320 |
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| End bp | 3105624 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962985 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_569916 |
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| Protein GI | 91977257 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.470298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA TCAAAGCGAT CCGCGACAAT CCGACTGCGT TCGACGCCGC TTACACGAGG
CGAGGGCTCT CGCCGATCGC GGACAGTCTG ATCAAGCTCG ACGAGACCCG CCGCATCGCG
ATTCTCGCCT CGGAGCAGGC GCAGGCGCGG CGCAATGCGG CGTCGAAGGA GATCGGCGAG
GCCAAGAAGG CCAAGGACAA TGCGCGCGCC GAGGTGCTGA TGGCCGAGGT CGCCGAGCTC
AAGACCACGA TGCCGGCGCT CGAGGCCGCG GTGAAGGACG CCGACGAGGC GCTGAAGACA
GCGCTGTCGG AAATCCCCAA TTTGCCGCTT GCCGACGTGC CCGAGGGCGC CGACGAGCAC
GGCAATGTCG AGCGGCATCA TTTCGGCGCC AAGCGCAGCT ACACGTTCAC GCCGAAGGCG
CATGACGATC TCGGCGAAGC ACTGGGCATG ATGGACTTCG AAGCCGCCGC GAAACTCTCG
GGCGCGCGCT TCGTCGTGCT GAAGAACGGC CTCGCCCGGC TCGAGCGCGC GATCGGTCAG
TTCTTTCTCG ACGTCCACAC CGGCGAGCAC GGCTACACGG AAGTGAATCC GCCGTTGCTG
GTGAAGGACG ACGCGATGTT CGGCACGGCG CAGCTTCCGA AATTTCGTGA CGATCAGTTC
GCTGCCGGCG CCATCGGCAG TGGAGGTGAG GGATATTGGC TCATCCCCAC CGCCGAAGTC
TCGCTCACCA ATCTCGTCCG CGAATCCATC CTCGACGAAA AAGAGCTGCC AATGCGCTTG
ACCGCGTTGA CGCCTTGCTT CCGCGCCGAG GCCGGCGCTG CGGGACGTGA TACGCGCGGG
ATGATCCGAC AGCATCAGTT CACCAAGGTC GAGCTGGTGT CGATCACCAC GCCGGAGAAG
TCCAAGGACG AGCACGAACG GATGCTGAGC TGCGCCGAGG AGGTGCTGCG CCGGCTCGGG
CTGCACTACC GGGTGATGAC GCTGTGCACC GGCGACATGG GCTTCGCCTC GCAGAAGACC
TACGACATCG AAGTCTGGAT GCCGGGACAA GGTGAGGGCG GCGCGTATCG CGAGATTTCA
TCGTGCTCGG TGTGCGGTGA CTTCCAGGCG CGCCGGATGG ATGCGCGGTC GCGCGGCCCG
GACGGCAAGC CGCGCTTCGT CCACACGCTG AACGGCTCCG GCACCGCCGT CGGCCGCGCG
CTGATTGCGG TGATCGAGAA CTATCAGCAA GAGGACGGCT CGATCGCCGT GCCCGACGTG
CTGCTGCCCT ATATGGGCGG GCTGAAAGTG ATCGCGGCCG CGTGA
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| Protein sequence | MHDIKAIRDN PTAFDAAYTR RGLSPIADSL IKLDETRRIA ILASEQAQAR RNAASKEIGE
AKKAKDNARA EVLMAEVAEL KTTMPALEAA VKDADEALKT ALSEIPNLPL ADVPEGADEH
GNVERHHFGA KRSYTFTPKA HDDLGEALGM MDFEAAAKLS GARFVVLKNG LARLERAIGQ
FFLDVHTGEH GYTEVNPPLL VKDDAMFGTA QLPKFRDDQF AAGAIGSGGE GYWLIPTAEV
SLTNLVRESI LDEKELPMRL TALTPCFRAE AGAAGRDTRG MIRQHQFTKV ELVSITTPEK
SKDEHERMLS CAEEVLRRLG LHYRVMTLCT GDMGFASQKT YDIEVWMPGQ GEGGAYREIS
SCSVCGDFQA RRMDARSRGP DGKPRFVHTL NGSGTAVGRA LIAVIENYQQ EDGSIAVPDV
LLPYMGGLKV IAAA
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