| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2786 |
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| Symbol | |
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| ID | 4023284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3103739 |
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| End bp | 3104323 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962984 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_569915 |
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| Protein GI | 91977256 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.428179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGGATTC TTCGCACAAC GCTGCGCCTG GGGCTGGCTT CGCTGGCGCT GTTCACCTTG
CTGATCGCGC CGCCTGGGCC GGCGCTGGCG CAATCCTCGC CGGCTGAATT GATCTCGCAG
TTCCGCGCCA AGAACGGCGA GGGCGCGGTG ACGATGGACG CGACGCTGAA CGCGATCGCG
CAGGAGCAGG CCGCGGCGAT GGCGGCGAAG GACGTGCTGG ATCACGACGT CGCCGGCGGA
TTTACGTCGC GCGTCGCGCG ATCGAAGGCT GCCAGCGCGG CCGAGAACAT CGCATATGGC
TACGCCGATT TTCCACGAAC GCTCGGGCAG TGGATCAATT CGTCCGGGCA TCGCCGCAAC
CTGTTGCTGA AAGGTGCCTC GAAAGTCGGC ATCGCCAATG CCAAGAGCGC CAGCGGCAAG
ACCTATTGGG CGATGGTGAT CGCCGGCGGC TACGACAAGC CGAAACCCAA ACCCGATCCC
AAGACCAAGC CCGCGAAAGA CAAGGCCGGC AAGGATGCTT CAAGCAAGCC GAAGCCGACT
GCGCCGCGCG ACTGCACCAT CCGGATGTTG GGGATGTGTA TCTGA
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| Protein sequence | MRILRTTLRL GLASLALFTL LIAPPGPALA QSSPAELISQ FRAKNGEGAV TMDATLNAIA
QEQAAAMAAK DVLDHDVAGG FTSRVARSKA ASAAENIAYG YADFPRTLGQ WINSSGHRRN
LLLKGASKVG IANAKSASGK TYWAMVIAGG YDKPKPKPDP KTKPAKDKAG KDASSKPKPT
APRDCTIRML GMCI
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