Gene RPD_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2779 
Symbol 
ID4023277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3096523 
End bp3097500 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID637962977 
Producthypothetical protein 
Protein accessionYP_569908 
Protein GI91977249 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.548946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.669492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA AAACCAAACC CAAACCTTCC CGCCCGGCCC GGCCCACGGC GAAAAAAGCA 
GCCGCCCGTC GCCGCAGCCC CGCGGCCAAG ACGGTGGCCC CGCTCCCGGA TTCGACCACG
CTGGACCGGA TTGCCCGCGC TCTGGAAGGG ATTTCCGCGC ATTTGGCGGG GAGTTCCGCG
CAACCGGCCG ACACCGCGCT GGCCGGCGCG GAGGCTTTCG TCTGGCATCC GGAAGGCCGG
CTCGCGCCGG TTCCCAAGGT CAGCCGGGTC GATCTCGACC TGCTGCAGGG GATCGACCGG
ATGCGCGATA CGCTGATCGA AAACACCGAA CGGTTCGCAA CCGGCCTGCC CGCCAATAAC
GCTTTGTTGT GGGGCGCCCG CGGCATGGGC AAATCGTCGC TGGTCAAGGC CGCCCATGCC
AGCGTCAACG CGCGGCCCGA CGTCGCCGGT ACGCTGAAAC TGATCGAGAT CCATCGCGAG
GACATTGAAA GCCTTCCCGC GCTGATGACG CTGCTGCGGG CCTCGGCGTA TCGCTTCATC
GTGTTCTGCG ACGACCTGTC GTTCGACGGC AACGACGCAT CCTACAAATC GCTGAAGGCG
GTGCTGGAGG GCGGCATCGA AGGCCGGCCC GACAATGTGA TTCTCTACGC CACCTCCAAC
CGCCGACATC TGTTGCCGCG CGACATGATG GAGAACGAGC GCTCGACCGC GATCAATCCC
GGCGAAGCGG TCGAGGAGAA GGTGTCGCTG TCGGACCGCT TCGGCCTGTG GCTCGGCTTC
CACAAATGCA GCCAGGACGA ATTCCTCGCG ATGGTGCGCG GCTATTGCAA GCATTTCGGC
GTCGCGATCG ACGACGAGCA GCTCGAGCGC GAAGCGCTGG AATGGTCGAC GACGCGCGGC
TCCCGCTCCG GCCGCGTCGC CTGGCAGTTC GTGCAGGATC TCGCCGGCCG GCTCAGGGTA
CGGCTCGAAA CCAAGTAA
 
Protein sequence
MAKKTKPKPS RPARPTAKKA AARRRSPAAK TVAPLPDSTT LDRIARALEG ISAHLAGSSA 
QPADTALAGA EAFVWHPEGR LAPVPKVSRV DLDLLQGIDR MRDTLIENTE RFATGLPANN
ALLWGARGMG KSSLVKAAHA SVNARPDVAG TLKLIEIHRE DIESLPALMT LLRASAYRFI
VFCDDLSFDG NDASYKSLKA VLEGGIEGRP DNVILYATSN RRHLLPRDMM ENERSTAINP
GEAVEEKVSL SDRFGLWLGF HKCSQDEFLA MVRGYCKHFG VAIDDEQLER EALEWSTTRG
SRSGRVAWQF VQDLAGRLRV RLETK