| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2773 |
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| Symbol | |
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| ID | 4023271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3090328 |
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| End bp | 3091761 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637962971 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_569902 |
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| Protein GI | 91977243 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.890417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.773607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCG CTGTTTTGAC TACCCAACCC GTCCACATCA TTGGCGCCGG CCTCGCCGGC
TCGGAAGCCG CCTGGCAGGT CGCGCGCGCC GGCATTCGCG TCGTGCTGCA CGAGATGCGG
CCCGACCGGA TGACGCAGGC ACACAAGACC GACGGCCTTG CCGAACTGGT CTGCTCCAAC
TCGTTTCGCT CCGATGACGC CGCCAACAAT GCGGTCGGCC TGCTCCATGC CGAAATGCGC
AAGCTCGGCT CGCTGGTGAT GCGCGCGGCG GACGCCAACC AGGTGCCGGC CGGCGGCGCT
CTTGCGGTCG ATCGCGACGG CTTCTCCGCC GCGGTGACCA AGGCGCTCGC CGAACATCCG
CTGATCGAGA TCCGCCGCGA GGAAATCGGC GGCCTGCCGC CGGAGGATTG GGGCAACGTC
ATCATCGCCA CCGGCCCGCT GACCTCGGCG CCGCTGGCGG AAGCGATCAG GGCGCTGACC
GACGAGTCAG CGCTGGCCTT CTTCGACGCC ATCGCGCCGA TCGTGCATCG CGACTCGATC
GACATGTCGG TCGCCTGGTT CCAGTCGCGC TACGACAAGG CCGGCCCGGG CGGCAGCGGC
GCGGACTACC TCAACTGCCC GATGACGCGC GAGCAATATG ACGGCTTCGT CGATGCGCTG
ATCGAGGGCG AGAAGGTCGA TTTCAAGGAC TGGGAGCGCG ACACGCCGTA TTTCGACGGC
TGTTTGCCGA TCGAAGTGAT GGCCGAGCGC GGCCGCGAGA CCCTGCGCCA CGGGCCGATG
AAACCGGTCG GCCTCACCAA TCCGCACAAT CCGCTGGTGA AGTCCTACGC CATCGTACAG
CTCCGCCAGG ACAACAAGCT CGGCACGCTG TTCAACATGG TCGGCTTCCA GACCAAGCTG
AACTACGGCG CGCAGCAGCG CGTCTTCCGC ACCATCCCGG GCCTGGAAAA TGCTGAATTC
GCAAGGCTTG GCGGCCTACA TCGCAACACG TTTCTGAACT CGCCGAAATT GCTCGATCCG
CAGCTCCGGC TGCGCGCCGC GCCGCGGCTG CGCTTCGCCG GCCAGATGAC CGGCTGCGAG
GGCTACGTCG AATCGGCCGG CATCGGCCTG GTCGCCGGGC TCTGCGCCGC CGCCGATGCG
ATCGGCCAGA CGCTGGCGGC GCCGCCGCCG ACCACGGCGC TCGGCGCCCT GCTCGGCCAC
ATCACCGGCG GCCATATCGA GACCATCGAT GCCGGCCCGC GCTCGTTTCA ACCGATGAAT
ATCAATTTCG GCCTGTTCCC GCCGCTGGCG ACGGCCCCGA CCCACGGCCC CGACGGCAAG
AAGCTGCGCG GCCCGGAGAA GTCGGTCGCC AAGAAGCAGG CGCTGAGCGC CCGCGCACTG
GCCGATCTCG ACCGCTGGAT CGGCGACTGC CTGAAGCTGC CCGCGGCGGC CTAA
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| Protein sequence | MISAVLTTQP VHIIGAGLAG SEAAWQVARA GIRVVLHEMR PDRMTQAHKT DGLAELVCSN
SFRSDDAANN AVGLLHAEMR KLGSLVMRAA DANQVPAGGA LAVDRDGFSA AVTKALAEHP
LIEIRREEIG GLPPEDWGNV IIATGPLTSA PLAEAIRALT DESALAFFDA IAPIVHRDSI
DMSVAWFQSR YDKAGPGGSG ADYLNCPMTR EQYDGFVDAL IEGEKVDFKD WERDTPYFDG
CLPIEVMAER GRETLRHGPM KPVGLTNPHN PLVKSYAIVQ LRQDNKLGTL FNMVGFQTKL
NYGAQQRVFR TIPGLENAEF ARLGGLHRNT FLNSPKLLDP QLRLRAAPRL RFAGQMTGCE
GYVESAGIGL VAGLCAAADA IGQTLAAPPP TTALGALLGH ITGGHIETID AGPRSFQPMN
INFGLFPPLA TAPTHGPDGK KLRGPEKSVA KKQALSARAL ADLDRWIGDC LKLPAAA
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