| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2741 |
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| Symbol | |
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| ID | 4023239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3060344 |
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| End bp | 3063475 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962940 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_569871 |
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| Protein GI | 91977212 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC GCGTCATCGC GTGGTCCGCG CACAATCTGC TGCTGGTGCT GTTCGGCGCC
GGATTCGCCG CAGCGGCGGG CCTCTACGCC CTGCTCCATC TCCCGCTCGA CGCGATCCCT
GACCTCTCCG ACACCCAGGT CGTAATCTAC ACCGAGTATC CCGGCCAGGC GCCGCAGGTG
ATCGAGGATC AGGTCACCTA TCCCTTGACC ACGGCGATGC TGACGGTGCC GAAGTCGAAA
GTGGTGCGCG GCTTCTCGTT CTTCGGCGCG TCGTTCGTTT ACGTGATCTT CGAGGACGGT
ACCGACATCT ATTGGGCGCG TTCGCGCGTG CTCGAGTTCC TCAACGGCGC CGCGGCGCGA
TTGCCGGCCG GCGTCGCTCC GACGATCGGT CCGGACGCCA CCGGCGTCGG CTGGGTGTAT
CAGTACGCCG TGGTTTCCAA GGAGCTGAAC CTCGCCGATA CCCGCAGCCT TCAGGACTGG
ACCCTTCGCT TCGCGCTCGC CAAGGCCGAG GGCGTCGCCG AAGTCGCGAG CATCGGCGGC
TTCGTCAAGC AGTACAACGT CGTGCTCGAC CCGCAGCGGA TGCGCGATCG CGGCATCACC
ATGCAGCGGA TGCGCGAGAC GATCCGCTCC AGCAACGCCG ACGTCGGCGG CCGCACTGTC
GAACTGTCCG AATTCGAGTA TGTCATTCGC GGCAAGGGCT ATCTGAAGGA CATCAACGAT
CTCGGCAATA TCGTGCTGAA GACCAGCAAC GGCACGCCGG TGCTGCTGCG CGACGTTGCA
CGAGTCGAAC TCGGCCCCGA TGAGCGGCGC GGCATCGCCG AGCTGAACGG CGAAGGCGAG
GTTGCGAGCG GCATCGTGCT GCAGCGCTTC GGCGTCAATG CGCTCGACGT CATCGAGAAC
GTCAAGAAGC GCTTCAAGGA GATCGCGAGC AGCCTGCCGA AATCGGTGGA GATCGTTCCG
GTCTACGATC GCTCCAACCT GATCTACGCC GCGGTCGAGA CCTTGAAGAC CACGCTGCTC
GAGGAGAGCC TCGTGGTGGC GGCGGTGTGC ATCGTGTTCC TGTTGCACGT GCGCAGCGCG
CTCGTCGCCA TCCTGATGCT GCCGGTCGGC GTGTTGATGG CGTTCGGAGC GATGAAGCTG
ATCGGCCTCG GCTCCAACAT CATGAGCCTC GGCGGCATCG CGATTGCGAT CGGCGCCATG
GTCGATGCTG CGATCGTGAT GATCGAGAAC GCCCACAAGC ATCTCGAGCG CGCCGAGCCT
GGTCGCTCGC GCGTGAGCGT GCTGATCGAG GCCGCGTCCG AAGTCGGACC CGCGCTGTTC
TTCAGCCTGC TGATCATCAC CGTGTCGTTC ATGCCGATCT TCACGCTGGA ATCGCAGGAG
GGCCGGCTTT TCAGCCCGCT CGCCTTCACC AAGACCTTCG CGATGGCCGC AGCCGCATTG
CTGTCGGTCA CGCTGGTGCC GGCGCTCATG GTGATCTTCG TCCGCGGACG GTTCGTCCCG
GAGCACAAGA ACATCGTCAA TCGCGCGCTG ATCTTCGTCT ACCGTCCGGT GATCAGCGGC
GTGCTCCGCG CCAAGGTCGC GGTGATCCTC CTCGCGCTCG TTGTGCTCGG CGTATCGATC
TGGCCGGCGC GTCAGCTCGG CACCGAATTC ATGCCGGCGC TCGACGAGGG CACGCTGCTG
TACATGCCGA CCACCCTGCC CGGCATCTCG ATCACCAAGG CGGGCGAGCT GCTGCAGATG
CAGGACCGCA TCATTCGCGG CTTCCCGGAG GTCGCATCGG TCTACGGCAA GGCCGGCCGA
GCTGCGACTG CGACCGACCC GGCGCCGATC GAGATGTTCG AGACGGTGAT CAATCTGAAG
CCGAAGGAGC AATGGCGCCC CGGCCTCACC ACCGATGGTC TGATCGCCGA ACTCGACAAG
GCGCTGCAAT TCCCCGGCGT GTCCAACGCC TGGACCATGC CTATCAAGGC CCGCATCGAC
ATGCTCTCCA CCGGCATCCG GACGCCGGTC GGGGTCAAGG TGATGGGCAC CGATCTGGTC
GAGATCGACA AGCTCGCCAA GCAGATCGAA CGGGTGCTGA AAGCCGTGCC GGGGACGTTA
TCGGCCTATG CCGAGCGTGC GATCGGCGGC TATTACTTGG AGATCACGCC GGATCGCGCA
GCACTTGCGC GTTACGGTCT GTTGATCCAG GACATGCAGG ACGCCATCGC CATCGCGCTC
GGCGGCCAGA CGGTCACCAC CACAGTCGAG GGCCGCCAGC GCTTCAGCGT CAACATGCGC
TATCCGCGCG AGCTCCGCGA CAATCCGAAG GCGATCGCCA GCGACGTTCT GGTGCCGCTG
CCGGGCGGCG GGGCGGTGCC GCTCGGCGAG GTCGCGACGG TGACGCCGAC GCGCGGACCG
ACCTCGATCC GCACCGAGAA CGGCCAGCTT GCAACCTACA TCTATGTCGA CATCCGCGAC
CGCGACCTCG GCGGCTACGT CGCCGACGCA AAGCGGGCGG TTCAGGCCAG CATCGCGTTT
CCGCAAGGGT CATACGTCGT CTGGAGCGGC CAATACGAGT ACCTCGAGCG CGCCGCGGCG
CGGCTCAAGA TCGTCGTGCC GGTGACGCTG ATGATCATCT TCCTGCTGCT CTACCTGAAT
TTCAGGTCGC TGACGGAAAC GCTGATCGTG ATGCTATCGC TGCCGTTCGC GCTGGTCGGC
GGGCTGTGGA TGATGTGGGC GCTCGGCTTC AACCTGTCGG TCGCGGTCGC CGTCGGCTTT
ATCGCACTCG CCGGCGTGGC GGCAGAGACC GGCGTTGTGA TGCTGATCTA TCTCGATCAC
GCACTCGACG CGATGAAGGC GACCCGCGCC GCTGAAGGCC GGCCGCTGTC GCTGAGCGAT
CTGCACGCAG CGATCATGGA GGGCGCCGTC GACCGCGTTC GTCCGAAGAT GATGACGGTG
GTCGCGATCA TGGCCGGCCT GCTGCCGATT TTGTGGAGTA CCGGCGCCGG CTCCGAGATC
ATGCAGCGCA TCGCCGTGCC GATGATCGGC GGCATGGTCT CGTCCACCTT GCTGACGCTG
ATCGTCATCC CTGCGATCTA CGGCCTGATC AAGGGATTCC GGCTGCCGAA GCAAGGCGAC
GCAGCGGCGT GA
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| Protein sequence | MIARVIAWSA HNLLLVLFGA GFAAAAGLYA LLHLPLDAIP DLSDTQVVIY TEYPGQAPQV
IEDQVTYPLT TAMLTVPKSK VVRGFSFFGA SFVYVIFEDG TDIYWARSRV LEFLNGAAAR
LPAGVAPTIG PDATGVGWVY QYAVVSKELN LADTRSLQDW TLRFALAKAE GVAEVASIGG
FVKQYNVVLD PQRMRDRGIT MQRMRETIRS SNADVGGRTV ELSEFEYVIR GKGYLKDIND
LGNIVLKTSN GTPVLLRDVA RVELGPDERR GIAELNGEGE VASGIVLQRF GVNALDVIEN
VKKRFKEIAS SLPKSVEIVP VYDRSNLIYA AVETLKTTLL EESLVVAAVC IVFLLHVRSA
LVAILMLPVG VLMAFGAMKL IGLGSNIMSL GGIAIAIGAM VDAAIVMIEN AHKHLERAEP
GRSRVSVLIE AASEVGPALF FSLLIITVSF MPIFTLESQE GRLFSPLAFT KTFAMAAAAL
LSVTLVPALM VIFVRGRFVP EHKNIVNRAL IFVYRPVISG VLRAKVAVIL LALVVLGVSI
WPARQLGTEF MPALDEGTLL YMPTTLPGIS ITKAGELLQM QDRIIRGFPE VASVYGKAGR
AATATDPAPI EMFETVINLK PKEQWRPGLT TDGLIAELDK ALQFPGVSNA WTMPIKARID
MLSTGIRTPV GVKVMGTDLV EIDKLAKQIE RVLKAVPGTL SAYAERAIGG YYLEITPDRA
ALARYGLLIQ DMQDAIAIAL GGQTVTTTVE GRQRFSVNMR YPRELRDNPK AIASDVLVPL
PGGGAVPLGE VATVTPTRGP TSIRTENGQL ATYIYVDIRD RDLGGYVADA KRAVQASIAF
PQGSYVVWSG QYEYLERAAA RLKIVVPVTL MIIFLLLYLN FRSLTETLIV MLSLPFALVG
GLWMMWALGF NLSVAVAVGF IALAGVAAET GVVMLIYLDH ALDAMKATRA AEGRPLSLSD
LHAAIMEGAV DRVRPKMMTV VAIMAGLLPI LWSTGAGSEI MQRIAVPMIG GMVSSTLLTL
IVIPAIYGLI KGFRLPKQGD AAA
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