| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2740 |
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| Symbol | |
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| ID | 4023238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3058959 |
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| End bp | 3060347 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962939 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_569870 |
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| Protein GI | 91977211 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.135625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTGC TGCGTCCATT CACATTGCTC GCCCTCGTCG GGCTGGGGCT CTCTTCGTCG
ATGGTGTCGA CCGCGCAAGC TGTCGATCGA CCGCCGTTGT ACTACCGCGA TCCGACCGGC
GCGCCGCAAT GGTCAGCGAC GCCGAAGAAG GATGCCAGCG GCCGCGACTA TGTGCCGGTT
TACGACGAGG ACGACACGTC GTCTCAGTCG CCCAAGCCGA AAGCCGCTGC GGCCGATCCA
TCGCGGAAGA TTCTCTATTA CCGCAATCCG ATGGGCCTAC CCGACACCTC CCCGGTGCCG
AAGAAGGACC CGATGGGGAT GAACTACATC CCCGTCTATG AGGGCGACGA CACCGACGAC
GGTACGATCA AGCTCTCGCC CGGCAAGATC CAGCGCGCCG GCGTCAAATC AGAGTTGGTC
CAGCGCCGGC CGGTGCTGGT CTCGGTGAAA GCGCCGGGTG TCATCCAGCT CGACGAGCGC
CGCGTCTCGG TGATCGCGAT GCGCAGCGAG AGCTTCGTGC GCAAAGTCGA AGACGTGACC
ACAGGGACGC GCGTCAAGGC CGGCCAGCCG CTCATGGAGA TCTACAGCGC CGCAATTGCC
GCGGCAGCGG CCGATTATCT GTCCACCATC GCGTCCAAAA CGACCGCCGG CAATGAAACC
TTCGGCCGCG GCTCGCGGCA ACGCCTGATC AATCTGAACG TGCCCGAAGC GGCGATCGCC
GCGCTGGAGC AAACCAGGAT CGCGCCGGTC ACCGTGCAAT GGACGGCGCC CCGCGACGGC
GTCGTGCTCG AACGCAGCGC GATCGAAGGG ATGCGCGCCA ATGTCGGCGA CGTGTTGTTT
CGGATCGCTG ATGTGTCGGC GGTGTGGGCG GTGGTCGACG TCGCCGAGCG CGACCTCGGC
AGCATCGCGG TCGGACAAGC GGTGAGGATC CGCGCGCGCG CTTTCGCCAA CCGCATCTTC
GCCGGAGTGG TCAAGGTGAT CTACCCGCAG GTCAGCCGGG AGACCCGGGC GGTGCGCGTC
CGGATCGAAC TCGATAATCC GGATCTCGCC CTGCTTCCCG ACATGTATGT CGATGCCGAG
ATCGACATCG CCGATCCGGG CCCGGTGCTC ACCGTTCCGA ACTCCACAAT TCTGGACACC
GGCACCCGTC AGGTCGTGCT CGTCGACAAG GGGGACGGAC GCTTCGAACC GAGGGCCGTC
AAGCTCGGCC GCCGCGGCGA TGGCATGACC GAGATCACGG AAGGTTTGCA GGACGGCGAG
GCCGTCGTAA CGTCCGCCAA CTTCCTGATT GACGCCGAGA GCAATCTCAG GGCCGCGCTG
AGTGGATTCG CAGAGGCGGC TAAATCCGCT GCAACGGACG GCCGCTCCGA TGCAGGAGCG
CGGCCATGA
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| Protein sequence | MVLLRPFTLL ALVGLGLSSS MVSTAQAVDR PPLYYRDPTG APQWSATPKK DASGRDYVPV
YDEDDTSSQS PKPKAAAADP SRKILYYRNP MGLPDTSPVP KKDPMGMNYI PVYEGDDTDD
GTIKLSPGKI QRAGVKSELV QRRPVLVSVK APGVIQLDER RVSVIAMRSE SFVRKVEDVT
TGTRVKAGQP LMEIYSAAIA AAAADYLSTI ASKTTAGNET FGRGSRQRLI NLNVPEAAIA
ALEQTRIAPV TVQWTAPRDG VVLERSAIEG MRANVGDVLF RIADVSAVWA VVDVAERDLG
SIAVGQAVRI RARAFANRIF AGVVKVIYPQ VSRETRAVRV RIELDNPDLA LLPDMYVDAE
IDIADPGPVL TVPNSTILDT GTRQVVLVDK GDGRFEPRAV KLGRRGDGMT EITEGLQDGE
AVVTSANFLI DAESNLRAAL SGFAEAAKSA ATDGRSDAGA RP
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