Gene RPD_2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2738 
Symbol 
ID4023236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3055950 
End bp3056369 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content56% 
IMG OID637962937 
Producthistone-like nucleoid-structuring protein H-NS 
Protein accessionYP_569868 
Protein GI91977209 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.789792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA ATCGGTCAGC GGATTTAATC CCGAGCCGAT GGGAGGGAGC CGTGAAGGAT 
ATCGACCCAG ACGCAATGAC GGTTGATGAG CTCTGGGAGA TTCACGAACG GATCAGCCAG
GTGCTGTGCA GCAAAATCCA ATCCGAGCAG CGGAAACTGG ATGGTCACCT GTCTCGGCTG
CGGCTCGGAG TGACCAGCGG CGCAAATCAA CAGTCCGATG ACGAATCAGG TCCGAAGCCG
GCACGACGGC CCTACCCCAA GGTTTATCCG AAATATCGGA GCTTGAAGGA TCCTTCCTTG
ACCTGGGCGG GCCGCGGCAA GCAGCCGCTT TGGCTGATTG ACGAACTAAA GTCCGGAAAA
TCGATTGATG ATTTCTTGAT CCGCGCCAAG CCTTCGAATG TGCGCAAGAA GCGTCGTTAG
 
Protein sequence
MNRNRSADLI PSRWEGAVKD IDPDAMTVDE LWEIHERISQ VLCSKIQSEQ RKLDGHLSRL 
RLGVTSGANQ QSDDESGPKP ARRPYPKVYP KYRSLKDPSL TWAGRGKQPL WLIDELKSGK
SIDDFLIRAK PSNVRKKRR