Gene RPD_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2723 
Symbol 
ID4023221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3041015 
End bp3042118 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID637962922 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_569853 
Protein GI91977194 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.174098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCAT CTGTTGCGTG TTGCGTATGC GTCGTCGGCA CCCGTCCCGA AGCCATCAAA 
TTAGCCCCGA TCATCAAGCT GCTAGCGCGG ACACCTTGGG CAAAACCGGT GACTGTCACC
ACCGGTCAGC AGAGCGACCT GTTGGACAAC ACGCTCTGCG GTTTTGGCAT TCAGACCGAT
GTGGGCATTC CATACGAAAC GCCACTGGAC CTCGGGTCCA ATCTCGCCCG GATCATCGAG
CGACTTGATC AAACATTCCA ACGGATTGGG CCGCAGATCG TGATCGCGCA GGGCGACACC
ACGACCGCGC TGGCCGCTTG CATGGCGGCG TTCTATCGGC GGATCCCGTT CGTTCATGTC
GAGGCCGGGC TGCGCTCGGG CGAACTGAAT TCACCATATC CCGAGGAGTA TCATCGGCGA
ATGATCGCGA TTTCGGCGGC AATTAACTGC GCGCCGACCG AAAGGGCCGC CCAGAACCTG
ATCAACGAAA AAGTCAGCAG AGATACGATC CACGTGACCG GCAACACGGT GATCGACGCG
CTGCTGCAGA CGGCGCGGGC CAAGCCGCCG ATCCCCGCTC AGTTTCCAAA GGGCGACAAG
ACCATCCTGC TGACCACACA CCGGCGCGAG AGCTTCGGCC AGCCGATGCG CGAGGCCCTT
TCGGCGGTGC GGTCATTCCT CGATGCCAAT CCGGACGTGT CGGTGTTCTT TCCGGTGCAC
CCCAATCCGA CCGCACGCGA CGTCGCGGTC GACGTGCTGG GATCGCATCC GCAAGCGGTG
CTGAACCCGG CGCTGTCGTA TCGCGATCTG GTCGCATCGA TGCAGAAAAG CTGGGTGGTG
CTGACCGACA GCGGCGGGTT GCAGGAAGAG GCGCCAGCGC TGGGCAAGCC GGTGCTGATC
CTGCGCGACA GCACAGAGCG GCCGGAAATG GTCGAGGCCG GCGCGGCGCG CATCGTTGGA
ACGCGGCGCG CCAGCGTGAT CGGCGCGCTC AGCGAACTGG CGCAGTCGAG CGCCACCTAT
CAGCGAATGG CGCGGCCGGC GTTTCCCTAC GGCAAGGGCA ACTCCGCCGG CCGGATTGTC
GGGCTGCTGC CCAGCATCCT CTAG
 
Protein sequence
MASSVACCVC VVGTRPEAIK LAPIIKLLAR TPWAKPVTVT TGQQSDLLDN TLCGFGIQTD 
VGIPYETPLD LGSNLARIIE RLDQTFQRIG PQIVIAQGDT TTALAACMAA FYRRIPFVHV
EAGLRSGELN SPYPEEYHRR MIAISAAINC APTERAAQNL INEKVSRDTI HVTGNTVIDA
LLQTARAKPP IPAQFPKGDK TILLTTHRRE SFGQPMREAL SAVRSFLDAN PDVSVFFPVH
PNPTARDVAV DVLGSHPQAV LNPALSYRDL VASMQKSWVV LTDSGGLQEE APALGKPVLI
LRDSTERPEM VEAGAARIVG TRRASVIGAL SELAQSSATY QRMARPAFPY GKGNSAGRIV
GLLPSIL