| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2722 |
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| Symbol | |
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| ID | 4023220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3039404 |
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| End bp | 3040423 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962921 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_569852 |
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| Protein GI | 91977193 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.194387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTT CACGCAGGAC GTTGTTGAAG GCATCGGCGG CAGCGGCTGC GCTCGGTGGT
ATCGGAATGC CGACTGTCGC GCGCGCGGCG GAGGCCGAGT TCGTCTACAA GTATGCCAAC
AACCTGCCCG ACACCCATCC GCTGAATGTC CGTGCGCGCG AGATGTCGGC GGCGATCAAG
GCCGAGACCA ACGGCCGGTT CGACCTTCAG ATCTTCCCGA ACAATCAGCT CGGTTCCGAC
ACCGACATGC TGAGCCAGAT CCGCTCCGGC GGCGTCGAGT TCTTCACGCT GTCCGGCCTG
ATCCTGTCGA CCCTGGTGCC GGCGGCCTCG ATCAACGGCA TCGGCTTCGC CTTCCCGGAT
TACGACACGG TCTGGAAGGC GATGGACGGC GAACTCGGCG GCCATGTCCG TGGCGAGATC
ACCAAGGCCG GCCTCGTGGT GATGGACAAG ATCTGGGACA ACGGCTTCCG CCAGACCACC
TCCTCGACCC GTCCGATCAA CGGCCCGGAA GATTTCAAGG GTTTCAAGAT CCGGGTGCCG
GTTTCGCCGC TATGGACCTC GATGTTCAAG GCGTTCGACG CCTCGCCGGC CTCGATCAAT
TTCAGCGAAG TCTATTCGGC GCTGCAGACC AAGGTGGTCG AGGGCCAGGA GAATCCGCTG
GCGCTGATTT CCACCGCCAA GCTCTATGAA GTGCAGAAGT ACTGCTCGCT GACCAACCAT
ATGTGGGACG GCTTCTGGTT CCTGGCGAAC CGCCGGTCCT GGGAGCGGCT GCCGGTCGAC
GTCCGGGAGA TCGTCGCCAG GAACATCAAC GCCGCCGCGG TCAAGGAGCG CGAGGACACG
GCCAAGCTGA ATGCCACGGT GCGCGAGGAA CTCGCCGGCA AGGGCCTGAT CTTCAATCAG
CCGACGGTGA CGCCGTTCCG CGACAAGCTG CGGTCGGCCG GGTTCTACGC CGAGTGGAAG
GGCAAATACG GCGACCAGGC GTGGTCGCTG CTCGAGAAGT CCGTCGGCAA GCTCGCGTAA
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| Protein sequence | MSVSRRTLLK ASAAAAALGG IGMPTVARAA EAEFVYKYAN NLPDTHPLNV RAREMSAAIK
AETNGRFDLQ IFPNNQLGSD TDMLSQIRSG GVEFFTLSGL ILSTLVPAAS INGIGFAFPD
YDTVWKAMDG ELGGHVRGEI TKAGLVVMDK IWDNGFRQTT SSTRPINGPE DFKGFKIRVP
VSPLWTSMFK AFDASPASIN FSEVYSALQT KVVEGQENPL ALISTAKLYE VQKYCSLTNH
MWDGFWFLAN RRSWERLPVD VREIVARNIN AAAVKEREDT AKLNATVREE LAGKGLIFNQ
PTVTPFRDKL RSAGFYAEWK GKYGDQAWSL LEKSVGKLA
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