Gene RPD_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2719 
Symbol 
ID4023217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3034865 
End bp3035665 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID637962918 
Productputative hydrolase 
Protein accessionYP_569849 
Protein GI91977190 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0507266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA CGCTCACCAT TCTCGGCTCA GGCTCTTCCG CCGGCGTGCC GCGCCCGGCG 
CTCGGCTGGG GCGCGGCTGA TCCGAGCAAT CCCAAGAACC GTCGCCGCCG CTGTTCGCTG
CTGGCCGAGC GTGTGACGCC GGACGGCATC ACACGGGTGC TGATCGACAC CTCGCCCGAT
CTGCGCGAGC AACTGATCGA CGCCGACGTC GATCATCTCG ACGCGGTGTT CCTGACCCAC
GAGCACGCCG ACCAGACCCA CGGCATCGAC GATCTACGCT CGGTGGTGCT GCACATGAAG
CAGCGCATCC CGGTCTATCT CAACAAGTCG ACCGCGGACC ACGTCCTGCT GCGGTTCGCC
TATTGCTTCA CGCGAGCGCC CGGCAGTTCC TATCCGCCGA TCCTGGACTC CCGCAGCATC
GAGGCCGGCG AGAGCCGCAG TATCGCGGGC GCAGGCGGCG AGCTGACGCT GACGGCGTTC
CTGCTTCAGC ACGGCGACAT CCCGGCGCTC GGCTTCCGGA TCGACGCCGC CGCCTATACG
CCCGACGTCC ACGACATTCC GGAATCCAGC TTTGCGCAGC TCGAAGGCCT CGATCTGTGG
ATCATCGACG GCCTGCGCTA CAAGCACCAC GCCAGTCACT TCAACATCGA AGCCGCGCTG
AGGTGGATCG ACCGCTTCAA GCCGAAGCGC GCGGTGATCA CCAACATGCA CGCCGACCTG
GACTACGAGA CGCTGCGGCG GGAGCTGCCG GAGGGCGTCG TGCCGGGGTT CGACGGAATG
CGGCTCGACG TCGCGGGCTG A
 
Protein sequence
MTLTLTILGS GSSAGVPRPA LGWGAADPSN PKNRRRRCSL LAERVTPDGI TRVLIDTSPD 
LREQLIDADV DHLDAVFLTH EHADQTHGID DLRSVVLHMK QRIPVYLNKS TADHVLLRFA
YCFTRAPGSS YPPILDSRSI EAGESRSIAG AGGELTLTAF LLQHGDIPAL GFRIDAAAYT
PDVHDIPESS FAQLEGLDLW IIDGLRYKHH ASHFNIEAAL RWIDRFKPKR AVITNMHADL
DYETLRRELP EGVVPGFDGM RLDVAG