Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2719 |
Symbol | |
ID | 4023217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3034865 |
End bp | 3035665 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637962918 |
Product | putative hydrolase |
Protein accession | YP_569849 |
Protein GI | 91977190 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0507266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGA CGCTCACCAT TCTCGGCTCA GGCTCTTCCG CCGGCGTGCC GCGCCCGGCG CTCGGCTGGG GCGCGGCTGA TCCGAGCAAT CCCAAGAACC GTCGCCGCCG CTGTTCGCTG CTGGCCGAGC GTGTGACGCC GGACGGCATC ACACGGGTGC TGATCGACAC CTCGCCCGAT CTGCGCGAGC AACTGATCGA CGCCGACGTC GATCATCTCG ACGCGGTGTT CCTGACCCAC GAGCACGCCG ACCAGACCCA CGGCATCGAC GATCTACGCT CGGTGGTGCT GCACATGAAG CAGCGCATCC CGGTCTATCT CAACAAGTCG ACCGCGGACC ACGTCCTGCT GCGGTTCGCC TATTGCTTCA CGCGAGCGCC CGGCAGTTCC TATCCGCCGA TCCTGGACTC CCGCAGCATC GAGGCCGGCG AGAGCCGCAG TATCGCGGGC GCAGGCGGCG AGCTGACGCT GACGGCGTTC CTGCTTCAGC ACGGCGACAT CCCGGCGCTC GGCTTCCGGA TCGACGCCGC CGCCTATACG CCCGACGTCC ACGACATTCC GGAATCCAGC TTTGCGCAGC TCGAAGGCCT CGATCTGTGG ATCATCGACG GCCTGCGCTA CAAGCACCAC GCCAGTCACT TCAACATCGA AGCCGCGCTG AGGTGGATCG ACCGCTTCAA GCCGAAGCGC GCGGTGATCA CCAACATGCA CGCCGACCTG GACTACGAGA CGCTGCGGCG GGAGCTGCCG GAGGGCGTCG TGCCGGGGTT CGACGGAATG CGGCTCGACG TCGCGGGCTG A
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Protein sequence | MTLTLTILGS GSSAGVPRPA LGWGAADPSN PKNRRRRCSL LAERVTPDGI TRVLIDTSPD LREQLIDADV DHLDAVFLTH EHADQTHGID DLRSVVLHMK QRIPVYLNKS TADHVLLRFA YCFTRAPGSS YPPILDSRSI EAGESRSIAG AGGELTLTAF LLQHGDIPAL GFRIDAAAYT PDVHDIPESS FAQLEGLDLW IIDGLRYKHH ASHFNIEAAL RWIDRFKPKR AVITNMHADL DYETLRRELP EGVVPGFDGM RLDVAG
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