| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2712 |
|---|
| Symbol | |
|---|
| ID | 4023210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3027298 |
|---|
| End bp | 3028242 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637962911 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_569842 |
|---|
| Protein GI | 91977183 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.824805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATTC GCGAGCGAGA TTCGTATGGC CGCGCCGCGC GAGCGGTTGC CGCTGCGGGT
GCGTGCTTGG TTCTCGCCAA CTGCACCCAG AACGGCAAGC TCAGCCGTGT CGATCCGAAA
TACGGCGTAT CATCGAGCCC GCGTGTGGTG GGTCCGGGCG AGCCGGTGCC GAAGGGCGGC
GGGGCCTATC GGGTCGGAAA GCCCTATATG GTTGCGGGGC GGATGTACGT CCCCGAAGAG
AACACCAGCT ATCGCGCCGA AGGTCTGGCC TCCTGGTACG GCAACGATTT CCACGGCCGC
CTGACCGCCA ATGGCGAAGT GTTCGACATG GCGTCGCTGT CGGCGGCCCA TCCGACCCTG
CCGATCCCGT CCTACGCCCG CGTCACCAAT CTCGGCAACG GCCGGTCGCT GGTCGTGCGC
GTCAATGACC GCGGCCCATA TCACGGCAAT CGGCTCATAG ACGTGTCGAA CCGTGCCGCG
GATCTGCTTG ATTTTAAACG CAATGGTACC GCGCGCGTGC GGGTTGAATA TGTCGGCCGG
GCGCCGCTTG AAGGCTCCGA CGATCGCCAG CTGGTCGCGA CCTTGCGCAG CAACGAACCC
GCGCCAGCGC CGTCGACCGT TCGGATCGCG TCGGCGAGTG CGTTCGTCCC GCAGTTCGCC
GGCGGCGGAC ATGCGGTTCG CGGCGACGTT CCGCTCCCGG AAGGGCGGCC GTATTCGCTC
GGCAACACGT CGGTGGACAT GGCGTCGGTC AGCGCAACTT CGGAAATCTC AGCCTCGCGC
AGCTCGCGTT CGGCCGGACG GACGCTGGCC CGCAATCAGC GCGCGGTGTC CTACGACAAT
GACGGCAACT ATGCCGACGT CGCGTCCCGC GCGACCGAGA GCGAGACGCC GGCTCGCGGC
AATGACGAGA TCGGCAGCCT GCTGTCGGCG CGCGGGCTGT ACTGA
|
|---|
| Protein sequence | MGIRERDSYG RAARAVAAAG ACLVLANCTQ NGKLSRVDPK YGVSSSPRVV GPGEPVPKGG
GAYRVGKPYM VAGRMYVPEE NTSYRAEGLA SWYGNDFHGR LTANGEVFDM ASLSAAHPTL
PIPSYARVTN LGNGRSLVVR VNDRGPYHGN RLIDVSNRAA DLLDFKRNGT ARVRVEYVGR
APLEGSDDRQ LVATLRSNEP APAPSTVRIA SASAFVPQFA GGGHAVRGDV PLPEGRPYSL
GNTSVDMASV SATSEISASR SSRSAGRTLA RNQRAVSYDN DGNYADVASR ATESETPARG
NDEIGSLLSA RGLY
|
|---|
| |