Gene RPD_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2708 
SymbolrpsI 
ID4023206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3023576 
End bp3024052 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID637962907 
Product30S ribosomal protein S9 
Protein accessionYP_569838 
Protein GI91977179 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.421371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.509442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA CCATGCAGTC TCTCGATCAG CTCTCGGCGC TGAAGACGAC GCAGCCGGAC 
GCCCCGACCT ACACCAAGAA GGTCGACAAG CAGGGCCGCG CCTACGCCAC CGGCAAGCGC
AAGGACGCGG TCGCCCGTGT CTGGATCAAG CCGGGCGCCG GCAAGGTCAC GGTCAATGCA
CGTGAGGTCG AGGTCTACTT CGCCCGTCCG GTGCTGCGCA TGATGATCCA GCAGCCGCTG
GTCGCCGCGG CGCGTGCCGG CCAGTACGAC GTGATCTGCA CCGTGGCGGG CGGTGGCCTG
TCCGGTCAGG CCGGCGCGGT GCGCCACGGC ATCTCCAAGG CGCTCACCAA TTTCGAGCCC
GAGCTGCGCG GCGTGCTGAA GAAGGGTGGC TTCCTGACCC GCGATTCGCG TGTCGTCGAG
CGCAAGAAGT ACGGCAAGGC GAAGGCCCGT CGTTCCTTCC AGTTCTCGAA GCGCTGA
 
Protein sequence
MSETMQSLDQ LSALKTTQPD APTYTKKVDK QGRAYATGKR KDAVARVWIK PGAGKVTVNA 
REVEVYFARP VLRMMIQQPL VAAARAGQYD VICTVAGGGL SGQAGAVRHG ISKALTNFEP
ELRGVLKKGG FLTRDSRVVE RKKYGKAKAR RSFQFSKR