Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2706 |
Symbol | |
ID | 4023204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3022527 |
End bp | 3022955 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962905 |
Product | phenylacetic acid degradation-like protein |
Protein accession | YP_569836 |
Protein GI | 91977177 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.593217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.495042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACATG CCAGAATGAG TGTAGCCGAA ATCGAGGATC TCCTGCATCG TGAGTTCCCG CAGGCTTTCA GTCACGGCGA TATTTCAATC GAGACCGCGG ACGGCCGCAC CAGCCTGCTG CGGCAGCGCT TCAACGACCG CATGTTGAGG CCCGGCGGCA CGGTGTCGGG ACCGACGCTG ATGGCGCTCG CGGATTTCGC GATGTACGTG GTGCTGTTGT CTGCGATCGG CCCGGTGGCG CTCGCGGTCA CGACCAATCT CAACATCAAT TTCCTGCGCA AGGGCCAGCC GGGGCAGGAT GTGGTCGCGG TGGCGCGACT GCTGAAGCTC GGAAAGCGGC TTGCGGTCGG CGAGGTGTCG CTGCTGTCCG GGACGTCGCC CGATCCGATC GCCCACGTCA CATCGACCTA CTCCATTCCG ATAGTTTGA
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Protein sequence | MTHARMSVAE IEDLLHREFP QAFSHGDISI ETADGRTSLL RQRFNDRMLR PGGTVSGPTL MALADFAMYV VLLSAIGPVA LAVTTNLNIN FLRKGQPGQD VVAVARLLKL GKRLAVGEVS LLSGTSPDPI AHVTSTYSIP IV
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