Gene RPD_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2706 
Symbol 
ID4023204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3022527 
End bp3022955 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID637962905 
Productphenylacetic acid degradation-like protein 
Protein accessionYP_569836 
Protein GI91977177 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.593217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.495042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATG CCAGAATGAG TGTAGCCGAA ATCGAGGATC TCCTGCATCG TGAGTTCCCG 
CAGGCTTTCA GTCACGGCGA TATTTCAATC GAGACCGCGG ACGGCCGCAC CAGCCTGCTG
CGGCAGCGCT TCAACGACCG CATGTTGAGG CCCGGCGGCA CGGTGTCGGG ACCGACGCTG
ATGGCGCTCG CGGATTTCGC GATGTACGTG GTGCTGTTGT CTGCGATCGG CCCGGTGGCG
CTCGCGGTCA CGACCAATCT CAACATCAAT TTCCTGCGCA AGGGCCAGCC GGGGCAGGAT
GTGGTCGCGG TGGCGCGACT GCTGAAGCTC GGAAAGCGGC TTGCGGTCGG CGAGGTGTCG
CTGCTGTCCG GGACGTCGCC CGATCCGATC GCCCACGTCA CATCGACCTA CTCCATTCCG
ATAGTTTGA
 
Protein sequence
MTHARMSVAE IEDLLHREFP QAFSHGDISI ETADGRTSLL RQRFNDRMLR PGGTVSGPTL 
MALADFAMYV VLLSAIGPVA LAVTTNLNIN FLRKGQPGQD VVAVARLLKL GKRLAVGEVS
LLSGTSPDPI AHVTSTYSIP IV