| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2696 |
|---|
| Symbol | |
|---|
| ID | 4023194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3011964 |
|---|
| End bp | 3012554 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637962895 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_569826 |
|---|
| Protein GI | 91977167 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.975578 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGTG GCCGCACCTT CGTCGTTTGT CTGTTGGGCG CGCTCGCGCT CGGCGGCTGC
ATGCGACGTC CCGCTCCGGT TGCGGTCGTC CAGCCGATGG CCTATGCGCC GCCCTCTTCC
GTGGCCGTGT CCCCGGACTA TCTGCTTGGC GCCGGCGACC GGCTGCGCGT GGTCGTCTAC
GGCCAGGACG CGCTGACGAA TACTTACGCA ATCGACGCGT CCGGTTCGAT TGCCTTGCCG
CTGATCGGCC GGGTGCCGGC GAGTGGACGC ACCGCCTCCG GTCTCGCCGG CGAGATCGCC
GCGCGGTTGC GCGGCGGCTT CATTCGCGAG CCATCGGTCG CAGTGCAGAT CGAGTCCTAT
CGGCCGTTCT TCATCCTCGG CGAGGTCGCC GCTCCCGGTC AGTACCCCTA TGTGCCCAAT
ATGAGTGTCG AGAGCGCCGT GGCCATCGCC GGCGGTTTTA CACCGCGGGC GCAACGCGAT
CGTGTCGTCC TCACTCACCC GGAGGGCGGC GCCGCGGTTC GCGCCACGGT GCCGCTCGGA
ACCCCTCTCA GACCCGGCGA CACCGTCCTC GTCGGGGAGC GCTGGTTCTG A
|
|---|
| Protein sequence | MHRGRTFVVC LLGALALGGC MRRPAPVAVV QPMAYAPPSS VAVSPDYLLG AGDRLRVVVY
GQDALTNTYA IDASGSIALP LIGRVPASGR TASGLAGEIA ARLRGGFIRE PSVAVQIESY
RPFFILGEVA APGQYPYVPN MSVESAVAIA GGFTPRAQRD RVVLTHPEGG AAVRATVPLG
TPLRPGDTVL VGERWF
|
|---|
| |