Gene RPD_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2693 
Symbol 
ID4023191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3008335 
End bp3009126 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID637962892 
Producthypothetical protein 
Protein accessionYP_569823 
Protein GI91977164 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0392853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.922392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG ATGCGGCGAC GATGCAGGAC GAAACTTTCG ACTTCGCGAC GATCGTCGCC 
GACCTCAACA CGCTGCTGCG GCTGAAAACC ACCGTGATCG GGATGAAGAT GTTCGCGACC
GCCGCCGAGA TGGAGGCGAT CCCGAAAATC CGCCGGCCGA ACGCGATCCA CACCACGGAT
CAGATCGTCA GCATGGCGTC GCGGCTGGGC TGGACCGTCG GCATCACCGG CGACGATCTG
GTCGGCGCGC AGTGCCGCGC GGTGATCGGA CTGGGGCCGC AGGACGAGCA GTGGCTCGCC
GGGCGCTCCT ATGTCGGCGT CTGGCACGCC ACGAAGGACG ACGCGAGCAA GCGGCAGCAC
GCGCTGAGCG TGGTTCCGTT CGGCAAGTAT CAGGCGATGG CGGTTTCGCC GCTCGCAAGC
GGCCGGCTGA ACCCCGACAT CTGCCTGGTC TACGCCACGC CGGGACAGAT GATCATCCTG
ATCAACGGCC TGCAATATTC CGGCTACAAG AAGTTCGAAT GGGGCGTCGT CGGCGAGACG
GCTTGCGCGG ATTCCTGGGG CAGGGCGCTG CTCACCGGCG AACCCAGCCT GTCGCTGCCG
TGTTTTGCCG AGCGCCGCTA CGGCGGCGTG CCGGACGAAG AGATGCTGAT GGCGCTGCAG
CCGGCGCATC TCGTCAAGGC GATCGACGGG ATGAAACAGC TCGCCAAGAA CGGCCTGCGC
TACCCGATCG CGCCCTACGG CATCCAGGCC GATGTCCGCG CCGGCATGGG CGTATCGTAT
GGGGAAACGT AG
 
Protein sequence
MSEDAATMQD ETFDFATIVA DLNTLLRLKT TVIGMKMFAT AAEMEAIPKI RRPNAIHTTD 
QIVSMASRLG WTVGITGDDL VGAQCRAVIG LGPQDEQWLA GRSYVGVWHA TKDDASKRQH
ALSVVPFGKY QAMAVSPLAS GRLNPDICLV YATPGQMIIL INGLQYSGYK KFEWGVVGET
ACADSWGRAL LTGEPSLSLP CFAERRYGGV PDEEMLMALQ PAHLVKAIDG MKQLAKNGLR
YPIAPYGIQA DVRAGMGVSY GET