| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2692 |
|---|
| Symbol | |
|---|
| ID | 4023190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3006438 |
|---|
| End bp | 3008342 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637962891 |
|---|
| Product | K+ potassium transporter |
|---|
| Protein accession | YP_569822 |
|---|
| Protein GI | 91977163 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3158] K+ transporter |
|---|
| TIGRFAM ID | [TIGR00794] potassium uptake protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0189185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CTCTCTCCAC GCCGCAGGTC GCATTGCCGG CCCAACGCCC GACTCCTTTC
CTGACGCTGT CGCTCGGCTC GATCGGCGTG GTCTATGGCG ACATCGGCAC CAGCCCGCTC
TATGCGCTCA AGGAGAGTCT GAACGCCGCG ACCGCCGGCA ACGCGCTGAC GGAAGCCATG
GTGCTCGGCG TGATGTCGCT GATGCTGTGG ACGCTCGTCA TCATCGTCAC GTTGAAATAC
GTGCTGCTGA TCATGCGCGC CGACAACCAC GGCGAGGGCG GCACACTGAC GCTGATGGCG
CTGCTGCAGC ATGTGATGCA CCGGCGCTTC GCGGCGATCT CGCTGCTCGG CATGGCCGGT
GCCGCGCTGT TCTACGGCGA CGCCATCATC ACGCCGGCGA TCTCGGTGCT GTCGGCGGTG
GAAGGCCTCA AGCTGGTCGC GCCGGTGTTC GACCCGTACA TCCTGCCGCT GTCGATGGCG
ATCCTGATCG GCCTGTTCGT CGTTCAGTTC CGCGGCACCG CGGCGGTCGC CGCCTGGTTC
GGGCCGATCA TGTTGCTGTG GTTCACCGTG ATGGCGCTCG GCGGCATCAT GAACCTGATC
ACCGATCTCT CCGTGCTGCG CGCGATCAAC CCGCTGTATG GCGTCGACTT CCTGATGCAT
CACGGCCGCG CCGGGCTGCT GGCGCTCGGC GCGGTGTTCC TCACCGTGAC CGGCGCGGAA
GCGCTATATG CCGACATGGG ACATTTCAGC CGCAGGCCGA TCCAGTTTGC ATGGTTCGCG
GTGGTGTTCC CCGCGCTCGC GCTTTGTTAT CTCGGGCAAG GCGCGATGCT GATGTCGCAT
CCGGAACGAC TGGAGAACCC GTTTTTCTTC CTGTTTCCGG AGTGGGCGCT GCTGCCGATG
GTCGGGCTCG CCACAGCGGC GACGATCATC GCCAGTCAGG CGGTGATCTC GGGCGCCTAT
TCGCTGACCC AGCAAGCGAT CCAGCTCGGA TTGCTGCCGC GGATGGAAAT CCGCCGCACC
TCGGAGACCG AGAAGGGCCA GATCTACATT CCGCGCGCCA ACTGGCTGCT GCTGATCGCA
GTGCTGTATC TGGTGTTCGC GTTCAAGTCC TCGAGCGCGC TGGCCTCGGC CTACGGCATC
GCGGTGACCG GAACGATGGT GATCACCAGC GTCATGGCTT ACTTCGTGAT GCGGAAATGC
TGGAAGTGGT CGGTGGCCAC CTCGGCGCTG ATCATCGCGC CGTTCCTCAC CGTCGACCTG
ATTTTCCTGA TGGCGAACAT GCTGAAGATC TTCGAGGGCG GCTGGATTCC TCTGGTGATC
GGCGGCGGCC TGATGGGCGT GATGATCACC TGGCGACGCG GCACCAAGAT CGTCGCCAAG
AAGACCGTCC GCGACGAAGT CGATCTCGGC GATTTCATCA AGTCGATCTC CGTATCTTCG
TCGATCAGCC GTGTGCGCGG GGTCGCGGTG TTTCTGACCG GCAACCCGAA CTCGACGCCG
ACCTCGTTGA TGCACAATCT GAAGCACAAC AAGGTGCTGC ACGAAAAGAA CGTGATCCTG
CGCGTCGTGA CAGAAGACGT GCCGCGCGTG CCGGAGGCCG AACGATCCTC GGTGGAGGTC
GTCAACGACC TTTTCTCGCG GATCGAACTG CGGTTCGGCT ACATGGAAAG CCCCAACGTG
CCGAAGGCGC TGGCCGCCTG CGCGGACCGT GGCTTCAGCT TCGACATCAT GAGTACGTCG
TTCTTTCTGT CGCGACGGGT GATCCGTCCG GCTGTGCCAT CCGAGATGCC GCGCTGGCAG
AGCCTGCTGT TTGCCAACAT GGCGAAATGG GCCGACGATG CCAGCCTCTA TTTCCGAATT
CCGACCGGAC GCGCGGTCGA GGTGGGGATG CAGATCAATG TCTGA
|
|---|
| Protein sequence | MSDALSTPQV ALPAQRPTPF LTLSLGSIGV VYGDIGTSPL YALKESLNAA TAGNALTEAM
VLGVMSLMLW TLVIIVTLKY VLLIMRADNH GEGGTLTLMA LLQHVMHRRF AAISLLGMAG
AALFYGDAII TPAISVLSAV EGLKLVAPVF DPYILPLSMA ILIGLFVVQF RGTAAVAAWF
GPIMLLWFTV MALGGIMNLI TDLSVLRAIN PLYGVDFLMH HGRAGLLALG AVFLTVTGAE
ALYADMGHFS RRPIQFAWFA VVFPALALCY LGQGAMLMSH PERLENPFFF LFPEWALLPM
VGLATAATII ASQAVISGAY SLTQQAIQLG LLPRMEIRRT SETEKGQIYI PRANWLLLIA
VLYLVFAFKS SSALASAYGI AVTGTMVITS VMAYFVMRKC WKWSVATSAL IIAPFLTVDL
IFLMANMLKI FEGGWIPLVI GGGLMGVMIT WRRGTKIVAK KTVRDEVDLG DFIKSISVSS
SISRVRGVAV FLTGNPNSTP TSLMHNLKHN KVLHEKNVIL RVVTEDVPRV PEAERSSVEV
VNDLFSRIEL RFGYMESPNV PKALAACADR GFSFDIMSTS FFLSRRVIRP AVPSEMPRWQ
SLLFANMAKW ADDASLYFRI PTGRAVEVGM QINV
|
|---|
| |