Gene RPD_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2679 
Symbol 
ID4023176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2992933 
End bp2993799 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content66% 
IMG OID637962877 
Productalpha/beta hydrolase fold 
Protein accessionYP_569809 
Protein GI91977150 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.113925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCCGA TCGAAACCAG GCGACTGGAG GCCAATGGCC TGTATTTCGC CATCGACGAG 
GCGGGACAGG GCAGCACGGT CGCGCTGCTG CTGCATGGTT TTCCGGAATG CCGCGCGTCG
TGGCGCCTGC AATTGCCTTT TTTGGCCGAA CTCGGCTGGC ACGCCGTCGC GCCTGATCTG
CGGGGCTATG GCGGCTCGAG CCGGCCGCAC GGCAGGGCCG CCTACACGAT CGAGCGCCTC
ACCGACGACG TTGCCGCGAT GTTCGCGGCA CTCGGCGGCA AACACAAGGT GCTGATCGGC
CACGACTGGG GCGGAGTGAT CGCATGGCAG ACCGCTCTGC GCGGCAAGAT CCACCTCGAC
GGGCTGATCA TCCTCAACGC GCCGCACCCC GACGTGTTCG CCCGCGAGCT TCGCCACAGC
TGGCGGCAGA GACTGCGGTC CTGGTACGTC GCCTTCTTCC AGTTGCCGTG GCTGCCGGAG
TGGCTGATGA CGCGTGACGA CGGCGCGGCG CTGGTGAAGA TGTTCAGGAG CCAAAGCCGC
AAGATTCCGG CCGAGCAGCT CGAGATCTAT CGCCGCAACG CCATTCAGCC CGGCGCGGCG
ACCGCGATGC TGAACTACTA CCGCGCCAAC ATCTCCGGTC TCGGCGGCGG CGCGGGCAGC
AATCCGACGA TCACGGTGCC GACGCTGATG ATCTGGGGCA AGGATGACCT CGCGCTCGAC
ATCGCACTGA CGGACGGCAA CGAGGCCTAT GTCGAGGACT TCACCCTGCA CAAATTGCCG
CGCGTGTCGC ATTGGGTACA GCAGGATGCG CCCGACGAGG TTAACGCACT GATCGCAGAT
TGGGCGCGGC AAAAGGGGCT GGCGTGA
 
Protein sequence
MVPIETRRLE ANGLYFAIDE AGQGSTVALL LHGFPECRAS WRLQLPFLAE LGWHAVAPDL 
RGYGGSSRPH GRAAYTIERL TDDVAAMFAA LGGKHKVLIG HDWGGVIAWQ TALRGKIHLD
GLIILNAPHP DVFARELRHS WRQRLRSWYV AFFQLPWLPE WLMTRDDGAA LVKMFRSQSR
KIPAEQLEIY RRNAIQPGAA TAMLNYYRAN ISGLGGGAGS NPTITVPTLM IWGKDDLALD
IALTDGNEAY VEDFTLHKLP RVSHWVQQDA PDEVNALIAD WARQKGLA