| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2674 |
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| Symbol | |
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| ID | 4023171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2987602 |
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| End bp | 2988210 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962872 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_569804 |
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| Protein GI | 91977145 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00828025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACCG GCATTGTCAC CGACATCGGC GAGATCGAAA AACTGACCCC GGTGGCGCAA
GGCCAGCTGC ATCGGCTGCG CATTCTGTGC AGCTTCGACC AGACCACGAT CGCCGACGGC
GCCTCGATCG CCAGCAACGG CGTCTGCATG ACCGTGGTCG GCTCCGGCGT CGCCGGCGGC
CGCACCTGGT ACGAGGTCGA CGCCGGCGCC GAGACTCTCG GCCTGACCAC TGCGAAGCAT
TGGAGCGTCG GCACGCGGCT CAATCTCGAG CGCGCGCTGA AGATCGGCGA CGAGCTCGGC
GGCCACATCG TCACCGGCCA TGTCGACGGC ATCGCCACCA TCGAGTCGCG CGAGGAGCTG
CCCGACATGG CGCGGTTCAC GCTGTCGACC TCGCGGGAGC TGGCGCGCTT CATCGCCGCC
AAGGGCTCGG TGACGCTCGA CGGCACCTCG CTGACCGTCA ATACCGTCGA CGACACACGG
TTCTCGGTGC TGATCATTCC GCACACGCTG AGCGCGACGA TCCTGTCGGG CTGGCAGCAG
GGCAGCGAGG TCAATCTCGA GGTCGACCTG ATGGCGCGCT ATGCCGCGCG GTTGAGCGAA
ATGAAATAG
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| Protein sequence | MFTGIVTDIG EIEKLTPVAQ GQLHRLRILC SFDQTTIADG ASIASNGVCM TVVGSGVAGG
RTWYEVDAGA ETLGLTTAKH WSVGTRLNLE RALKIGDELG GHIVTGHVDG IATIESREEL
PDMARFTLST SRELARFIAA KGSVTLDGTS LTVNTVDDTR FSVLIIPHTL SATILSGWQQ
GSEVNLEVDL MARYAARLSE MK
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