Gene RPD_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2652 
Symbolera 
ID4023149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2968913 
End bp2969836 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID637962850 
ProductGTP-binding protein Era 
Protein accessionYP_569782 
Protein GI91977123 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0337857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAA CCACTGACGC GGCTCCGGCC GCCACCCGCT GCGGCTTCGT CGCGCTGATC 
GGCGCTCCGA ATGTCGGCAA ATCCACGCTG GTCAACGCGC TGGTCGGCTC CAAGGTCACC
ATCGTGTCGC GCAAGGTGCA GACGACGCGC GCCCTGATCC GCGGCATCGT GATCGAAGGC
GGCTCGCAGA TCGTGCTGGT CGATACGCCC GGCATCTTCG CGCCGAAGCG CCGGCTCGAC
CGCGCCATGG TCAAGACCGC ATGGACGGGC GCGCATGACG CCGATCTGGT GTGCGTGTTG
CTCGACGCAC GCAGCGGCCT CGACGAAGAA GCCGAGACGA TCTTCGGTAA CCTCGCGAAT
GTCGGCCATC CGAAGGTGCT GGTCATCAAC AAGATCGATC TGGTGCCGCG CGAAAAGTTG
CTGGCGCTGA CGCAGACGGC CAACCAACGG CTGCACTTCG ACGAGACGTT CATGGTGTCG
GCATTGTCCG GCGACGGCGT CGACGATCTG CGCCGCGGAT TGGCCGCGCG GGTTCCGGCC
GGCCCGTTTC ACTATCCTGA AGATCAGATG TCGGACGCGC CGCTGCGCCA TCTCGCGGCC
GAGATCACCC GCGAGAAGAT CTTCCGCAAG CTGCATCAGG AACTGCCGTA TCAGTCGACG
GTCGAGACCG ATAGTTGGAC TGATCGAAAG GACGGCTCGG TGCGGATCGA GCAAACGGTC
TTTGTCGAAC GCGAAAGCCA GCGCAAGATC GTTCTCGGCA AGGGCGGCGC CACGATCAAG
TCGATCGGCG CCGAGGCGCG CAAGGAGATC GGCGAGATCC TCGAGCAGAC GGTCCACCTG
TTCCTGTTCG TGAAGGTGCG CGAGAACTGG GAGAACGACC CGGACCGCTA CCGCGAAATG
GGCCTCGAAT TTCCGAAGGA ATAG
 
Protein sequence
MPETTDAAPA ATRCGFVALI GAPNVGKSTL VNALVGSKVT IVSRKVQTTR ALIRGIVIEG 
GSQIVLVDTP GIFAPKRRLD RAMVKTAWTG AHDADLVCVL LDARSGLDEE AETIFGNLAN
VGHPKVLVIN KIDLVPREKL LALTQTANQR LHFDETFMVS ALSGDGVDDL RRGLAARVPA
GPFHYPEDQM SDAPLRHLAA EITREKIFRK LHQELPYQST VETDSWTDRK DGSVRIEQTV
FVERESQRKI VLGKGGATIK SIGAEARKEI GEILEQTVHL FLFVKVRENW ENDPDRYREM
GLEFPKE