Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2645 |
Symbol | |
ID | 4023142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2961929 |
End bp | 2962615 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637962843 |
Product | hypothetical protein |
Protein accession | YP_569775 |
Protein GI | 91977116 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0422082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00814137 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGACC ATTTCTGTCG CGCCAAAAAC CTAACGACTG AAAAACGAGA GATCTGGATG TCCACCTCTG CGAGCAACAA AATCGCGCTG TTTATCGATG GCGCCAATCT TTATGCGACT GCAAAAACCC TTGGTTTCGA TATCGATTAC AAACGACTGC TCAAGGAATT CCAGAGTCGC GGGACTTTGA TCCGCGCCTT CTACTACACC GCCATCATCG AGGATCAGGA ATACTCTTCG ATTCGTCCTC TGATCGACTG GCTCGACTAC AATGGCTACA CCGTGGTCAC CAAGGCGACC AAGGAGTTCA TCGATGCCAG CGGCCGTCGC AAGGTCAAGG GCAACATGGA TATCGAGCTC GCGGTCGACG CCATGGAATT GGCCGAGCAC ATTGACCAGA TGGTTCTGTT CTCCGGTGAC GGCGACTTTC GGTCGCTGGT CGAGGCAGTG CAGCGTCGCG GCGTCCGTGT CACGGTGATC TCGACGATCT CCAGCCAGCC GCCGATGATC GCCGACGAGT TGCGCCGTCA GGCCGACACC TTCACTGATC TGGTCGAACT GCAGTCCAAG ATCGGTCGTG ATCCGGCCGA TCGGCCGCCG CCGCGCGAAC CGCGTCATGC ACCGCAATTC CTGCAGCGTT CGGTGGCGAT GGCGCCGAGG GGCGCGGACG ACGATTTCGA AGACTGA
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Protein sequence | MRDHFCRAKN LTTEKREIWM STSASNKIAL FIDGANLYAT AKTLGFDIDY KRLLKEFQSR GTLIRAFYYT AIIEDQEYSS IRPLIDWLDY NGYTVVTKAT KEFIDASGRR KVKGNMDIEL AVDAMELAEH IDQMVLFSGD GDFRSLVEAV QRRGVRVTVI STISSQPPMI ADELRRQADT FTDLVELQSK IGRDPADRPP PREPRHAPQF LQRSVAMAPR GADDDFED
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