Gene RPD_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2645 
Symbol 
ID4023142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2961929 
End bp2962615 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID637962843 
Producthypothetical protein 
Protein accessionYP_569775 
Protein GI91977116 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0422082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00814137 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGACC ATTTCTGTCG CGCCAAAAAC CTAACGACTG AAAAACGAGA GATCTGGATG 
TCCACCTCTG CGAGCAACAA AATCGCGCTG TTTATCGATG GCGCCAATCT TTATGCGACT
GCAAAAACCC TTGGTTTCGA TATCGATTAC AAACGACTGC TCAAGGAATT CCAGAGTCGC
GGGACTTTGA TCCGCGCCTT CTACTACACC GCCATCATCG AGGATCAGGA ATACTCTTCG
ATTCGTCCTC TGATCGACTG GCTCGACTAC AATGGCTACA CCGTGGTCAC CAAGGCGACC
AAGGAGTTCA TCGATGCCAG CGGCCGTCGC AAGGTCAAGG GCAACATGGA TATCGAGCTC
GCGGTCGACG CCATGGAATT GGCCGAGCAC ATTGACCAGA TGGTTCTGTT CTCCGGTGAC
GGCGACTTTC GGTCGCTGGT CGAGGCAGTG CAGCGTCGCG GCGTCCGTGT CACGGTGATC
TCGACGATCT CCAGCCAGCC GCCGATGATC GCCGACGAGT TGCGCCGTCA GGCCGACACC
TTCACTGATC TGGTCGAACT GCAGTCCAAG ATCGGTCGTG ATCCGGCCGA TCGGCCGCCG
CCGCGCGAAC CGCGTCATGC ACCGCAATTC CTGCAGCGTT CGGTGGCGAT GGCGCCGAGG
GGCGCGGACG ACGATTTCGA AGACTGA
 
Protein sequence
MRDHFCRAKN LTTEKREIWM STSASNKIAL FIDGANLYAT AKTLGFDIDY KRLLKEFQSR 
GTLIRAFYYT AIIEDQEYSS IRPLIDWLDY NGYTVVTKAT KEFIDASGRR KVKGNMDIEL
AVDAMELAEH IDQMVLFSGD GDFRSLVEAV QRRGVRVTVI STISSQPPMI ADELRRQADT
FTDLVELQSK IGRDPADRPP PREPRHAPQF LQRSVAMAPR GADDDFED