| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2642 |
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| Symbol | smpB |
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| ID | 4023139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2960001 |
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| End bp | 2960474 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637962840 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_569772 |
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| Protein GI | 91977113 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.122546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0029074 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCGACA AGAACGAACG CGCGATCAAA GTGGTCGCGG AGAACCGCAA GGCGCGGTTC
AACTACGCAA TCGAAGACAC GATCGAGGCG GGCATCTCGC TGACCGGCAC CGAGGTCAAG
TCGGTCCGCA GCGGCAAGTC GACGATCGCC GAATCCTATG CGGATTCCCG CGGCGGGGAG
ATCTGGCTGA TCAATGCCAA TATCCCGGAA TATCTGCAGG CCAACCGCTT CAACCACGAG
CCAAAGCGGC CGCGCAAGCT GCTGCTGCAC CGAAAGCAGA TCAACAAGCT GATGGGCGCG
GTCGAGCGTC AGGGTATGAC TCTCATTCCG CTGAAGCTGT ACTTCAACGA GAAGGGCCGC
GCCAAGTTGC TGCTGGCGCT GGCCAAGGGC AAGCAGCTGC ACGACAAGCG GGAAACCGAA
AAGAAGCGCG ACTGGAGTCG CGAGAAAGGC CGGCTGTTGC GCGCGCGCGG CTGA
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| Protein sequence | MADKNERAIK VVAENRKARF NYAIEDTIEA GISLTGTEVK SVRSGKSTIA ESYADSRGGE
IWLINANIPE YLQANRFNHE PKRPRKLLLH RKQINKLMGA VERQGMTLIP LKLYFNEKGR
AKLLLALAKG KQLHDKRETE KKRDWSREKG RLLRARG
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