Gene RPD_2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2638 
Symbol 
ID4023135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2956956 
End bp2957363 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID637962836 
Productcupin 2, barrel 
Protein accessionYP_569768 
Protein GI91977109 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.746968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000814118 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATATCT TCTCAGCCGG TTCACGGCCG ACCCTCCGCG CGCCGAAGGA TTATTTCACC 
GGCACTGTGT GGCAGGACCC GATCGTCTCC GCGCCGGCTC CGGCGCGGCT GGCGGCGACC
CGTGTGGCGT TCGAGCCCGG CGCGCGGACG GCGTGGCATA CCCATCCGCT CGGCCAGACG
CTCTATGTGG TCACCGGAAT CGGCCGCGTT CAGACCGAAG GCGGACCCGT CCGGGAGATT
CGCGCTGGGG ATGTGGTCTG GATACCGCCA GGCGAGAAGC ACTGGCATGG CGCTTCGCCG
ACCAATGGCA TGACCCATAT CGCGATGCAG GAAGCGCTCG ACGGCAGCTT CGCGACCTGG
ATGGAGCATG TCTCGGATGC GGATTATGCC GCCGTCCCAT CGGCCTAA
 
Protein sequence
MDIFSAGSRP TLRAPKDYFT GTVWQDPIVS APAPARLAAT RVAFEPGART AWHTHPLGQT 
LYVVTGIGRV QTEGGPVREI RAGDVVWIPP GEKHWHGASP TNGMTHIAMQ EALDGSFATW
MEHVSDADYA AVPSA