Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2638 |
Symbol | |
ID | 4023135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2956956 |
End bp | 2957363 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637962836 |
Product | cupin 2, barrel |
Protein accession | YP_569768 |
Protein GI | 91977109 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.746968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000814118 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATATCT TCTCAGCCGG TTCACGGCCG ACCCTCCGCG CGCCGAAGGA TTATTTCACC GGCACTGTGT GGCAGGACCC GATCGTCTCC GCGCCGGCTC CGGCGCGGCT GGCGGCGACC CGTGTGGCGT TCGAGCCCGG CGCGCGGACG GCGTGGCATA CCCATCCGCT CGGCCAGACG CTCTATGTGG TCACCGGAAT CGGCCGCGTT CAGACCGAAG GCGGACCCGT CCGGGAGATT CGCGCTGGGG ATGTGGTCTG GATACCGCCA GGCGAGAAGC ACTGGCATGG CGCTTCGCCG ACCAATGGCA TGACCCATAT CGCGATGCAG GAAGCGCTCG ACGGCAGCTT CGCGACCTGG ATGGAGCATG TCTCGGATGC GGATTATGCC GCCGTCCCAT CGGCCTAA
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Protein sequence | MDIFSAGSRP TLRAPKDYFT GTVWQDPIVS APAPARLAAT RVAFEPGART AWHTHPLGQT LYVVTGIGRV QTEGGPVREI RAGDVVWIPP GEKHWHGASP TNGMTHIAMQ EALDGSFATW MEHVSDADYA AVPSA
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