| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2633 |
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| Symbol | rimO |
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| ID | 4023130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2951737 |
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| End bp | 2953062 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962831 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_569763 |
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| Protein GI | 91977104 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.359809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000423005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGCAGG CCGCCGCGCC AAAGATCAGT TTTGTCTCGC TGGGATGCCC CAAGGCGCTG
GTGGATTCCG AGCGGATCAT CACCCGGCTG CGCGCCGAGG GATACGAGCT CGCGCGCCAG
CACGACGGCG CCGATCTGGT GATCGTCAAT ACCTGCGGAT TCCTCGACAG CGCCAAGCAG
GAATCGCTCG CCGCGATCGG CGAAGCGATG GCCGCCAACG GCAAGGTGAT CGTCACCGGC
TGCATGGGCG CCGAGCCCGA GCAGATCGAA GCCGCCTATC CGGGCGTGCT GTCGATCACT
GGCCCGCAGC AATATGAGAG CGTGCTGGAA GCGGTGCATC GGGCCAAGCC GGCGCTGCAC
AATCCGCATC TCGATCTGGT GCCCGAGCAA GGCATCCGGC TGACGCCGCG GCACTACGCC
TATCTGAAGA TTTCCGAGGG CTGCAACAAC CGCTGCAGCT TCTGCATCAT TCCGAAGCTG
CGTGGTGATC TCGTGTCACG CTCCGCTGAC GACGTGTTGC GCGAGGCCGA GAAGCTGGTC
GCCGCCGGCG TCAAAGAACT ACTGGTGATC TCGCAGGACA CTTCGGCCTA CGGCGTCGAT
CTGAAATACG CCGAAAGCCC GTGGAAAGAT CGCACGGTCC GCGCCAAATT CATCGATCTT
GCGCGCGAAC TCGGCGAACT CGGCGCATGG GTGCGTCTGC ACTACGTCTA CCCCTACCCG
CATGTCGACG AAGTGATCGG GCTGATGGCC GAGGGCAAGG TGCTGCCCTA TCTCGACATC
CCGTTCCAGC ACGCGAGCCC CGATGTGCTC AAGCTGATGA AGCGCCCGGC GGCGCAGGAC
AAGACGCTCG ACCGCATCAA GCGCTGGCGC GCGGACTGCC CGGATCTGGC GCTACGCTCG
ACCTTCATCG TCGGCTTCCC CGGCGAGACC GAACGCGATT TTGAGTTCCT GCTAGACTGG
CTCGACGAGG CCGAGATCGA CCGCCTCGGC GCGTTCAAAT ACGAACCGGT CGCCGGCGCG
CCGTCGAATG CCCTGCCCGA CCAGATCAGC GCTGAGGTCA AGCAGGAGCG CTGGAATCGG
CTGATGGCGC GGCAGCAGGT CATCTCGGCG CGGCGGCTGA AGCGCAAGGT CGGTACCCGC
CAGCAGATCA TCATCGACGA AGTCGGGCCG ACCGTCGCCA AGGGCCGCTC CAAGGCCGAC
GCGCCGGAGA TCGACGGCAG CGTCTATCTC TCGAGCCGAC GCCCGCTCCG CGTCGGCGAG
ATCGTCACCG CCAAGATCGA CCGCGCCGAC GCGTATGATC TGCATGGGAC GGTCGCGGGG
TTCTGA
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| Protein sequence | MQQAAAPKIS FVSLGCPKAL VDSERIITRL RAEGYELARQ HDGADLVIVN TCGFLDSAKQ
ESLAAIGEAM AANGKVIVTG CMGAEPEQIE AAYPGVLSIT GPQQYESVLE AVHRAKPALH
NPHLDLVPEQ GIRLTPRHYA YLKISEGCNN RCSFCIIPKL RGDLVSRSAD DVLREAEKLV
AAGVKELLVI SQDTSAYGVD LKYAESPWKD RTVRAKFIDL ARELGELGAW VRLHYVYPYP
HVDEVIGLMA EGKVLPYLDI PFQHASPDVL KLMKRPAAQD KTLDRIKRWR ADCPDLALRS
TFIVGFPGET ERDFEFLLDW LDEAEIDRLG AFKYEPVAGA PSNALPDQIS AEVKQERWNR
LMARQQVISA RRLKRKVGTR QQIIIDEVGP TVAKGRSKAD APEIDGSVYL SSRRPLRVGE
IVTAKIDRAD AYDLHGTVAG F
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