Gene RPD_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2632 
Symbol 
ID4023129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2950565 
End bp2951539 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID637962830 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_569762 
Protein GI91977103 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.40031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000390702 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGAAAG CGGTGCGGGT GCATCAGGTG GGCGGTCCGG AGGCGCTGGT CTACGAGGCC 
ATCGAGCTGC CGCCGCCCGC AGACGGCGAG GTCCGCATTC GTCAGTACGC CGTCGGCTTG
AACTTCATCG ACGTGTACTT TCGCACCGGC CTGTACAAAG CGCCGACGAA GCCGTTCATC
GTCGGTAACG AGGCGGCCGG TGAGGTCGTC GCGGTCGGAC CGCACGTCAC TAATTTCCAC
CCCGGCGATC GCGTTGCGTA CTACTCGAAC CTCGGTGGTT ACGCCACCGA GCGGAACATT
GAAGCTACCA AGCTGGTGAA GCTTCCCGAC CACATCACCT ACGAGCAGGG CGCGGTGCTG
ATGCTCAAGG GGCTGACGGT GTGGTACCTG CTGCACAAGA CCTTCAAGGT CGAGCCGGGC
CATCGCGTGC TGATCCATGC CGCGGCCGGC GGCATCGGCC TGCTCGCCTG CCAGTGGGCG
CGGGCGCTCG GCGCTCATGT GATCGGCACC GTCGGCTCCA AGGCCAAGGC CGATCTCGCG
CTCGCCAATG GTTGCGATCA CGTCATCCTC TACAACGAGG AAGATTTCGT CGCGCGGGTG
AAGCAGATCA GCCGCAACGA ATTGTGCGAC GTGGTCTATG ACGGCGTCGG CAAGACGACG
TTCCCGGGAT CGCTGTCGTG CATCAAGCCG CGCGGGTTGT TCGTCTCGTT TGGAAACGCC
TCGGGCCCGG TGCCACCGTT CGCGCTGGCT GAACTGAACA ACCACGGCTC GCTGTTCGCG
ACGCGACCGA AGCTGAACGA CTATGTCGGC ACCCGCAAGG AACTGATCGA GGGCGCGGAC
ACGCTGTTCT CTGCGGTGAT CGAGGGCAAG CTGCATGTTC CGATCAACCA TGCCTACGCA
CTGAAAGACG CCGCGAAGGC GCATATCGAT CTGGAAGGCC GCGTCACGAC CGGCGCGTCG
ATCCTGAAGC CGTAA
 
Protein sequence
MTKAVRVHQV GGPEALVYEA IELPPPADGE VRIRQYAVGL NFIDVYFRTG LYKAPTKPFI 
VGNEAAGEVV AVGPHVTNFH PGDRVAYYSN LGGYATERNI EATKLVKLPD HITYEQGAVL
MLKGLTVWYL LHKTFKVEPG HRVLIHAAAG GIGLLACQWA RALGAHVIGT VGSKAKADLA
LANGCDHVIL YNEEDFVARV KQISRNELCD VVYDGVGKTT FPGSLSCIKP RGLFVSFGNA
SGPVPPFALA ELNNHGSLFA TRPKLNDYVG TRKELIEGAD TLFSAVIEGK LHVPINHAYA
LKDAAKAHID LEGRVTTGAS ILKP