Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2627 |
Symbol | |
ID | 4023124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2946146 |
End bp | 2946478 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637962825 |
Product | hemimethylated DNA-binding region |
Protein accession | YP_569757 |
Protein GI | 91977098 |
COG category | [S] Function unknown |
COG ID | [COG3785] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02097] hemimethylated DNA binding domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.255241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000297322 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCAAGA CGAGAACCGC CAAGTTTCAG ATCGGCCAGA TCGTTCGCCA CCGGATCTTT TCGTTCCGCG GGGTGGTGTT CGACATCGAT CCGGAATTCA ACAATACCGA GGAATGGTGG CTGTCGATTC CTGAAGAGGT CCGGCCGCAC AAGGACCAGC CGTTCTATCA CCTCCTCGCC GAGAACGCCG ATTCCGAATA CGTCGCTTAT GTCTCGGAAC AGAACCTGCT ACCGGACGAT TCCGGCGAGC CGATCCGGCA TTCGCAGGTC GCCGAAATCT TCGTCAAGGA CAAGGCCGGC GGCTATCGCC CGCGCAATCC GTCGTTGAAT TAG
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Protein sequence | MIKTRTAKFQ IGQIVRHRIF SFRGVVFDID PEFNNTEEWW LSIPEEVRPH KDQPFYHLLA ENADSEYVAY VSEQNLLPDD SGEPIRHSQV AEIFVKDKAG GYRPRNPSLN
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