Gene RPD_2619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2619 
Symbol 
ID4023116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2933363 
End bp2934148 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID637962817 
Producthypothetical protein 
Protein accessionYP_569749 
Protein GI91977090 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0231699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00087146 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGATC AACCTAGCCC GAATCTCGGT GAGACCATAC CGGACCCGCC GCGTGGATTC 
ATGGGTCGCG TCCGCAACTA TTTCCTGACC GGCATCGTGG TCGCAGGCCC CATTGCGATC
ACCTTTTATC TGACCTGGTG GTTCGTGAAC TGGGTCGACG GCTTCGTCCG ACCGTTTGTT
CCGGTCGACT ACCGTCCCGA AACCTACCTG CCATTCCCGG TGCCAGGCTC AGGTCTGGTC
GTCGCCTTCG TGGCTTTGAC TCTGCTCGGC TTCCTCACCG CCAATTTGAT CGGGCGAACG
TTGGTCGATC TCGGCGAACG GCTGCTCGGT CGGATGCCGG TGGTGCGCGC GATCTATCGC
GGCCTGAAAC AGGTATTCGA GACGCTGTTC TCGGGCAATG GTTCAAGCTT ACGCAAGGTC
GGCCTGGTGG AGTTTCCATC GCCGGGGATG TGGTCGATCG TCTTGATCTC GCTCCCGCCG
AACGAAGAGG TCGCGTCTCG GATTCCCGGC GGGGCCGAGC ACATCTCGGT GTTCCTGCCG
TGCGCACCGA ACCCGACCAC CGGCTTCTTC TTCTACGTCC CGAAGAACAA GGTGATCCCG
ATCGATATGA GCGCCGAAGA GGCAGCGACC CTCATCATGT CCGCAGGCGT GGTGCAGCCG
GGATCCGATC CGCAACGGAA GATCGCAGCG CTGGCCGCCA CCGCACTCGC CGCGAAAAGG
GCCGCGGGTG AACCGGAATC GGCGTTCTCC CGCCGCAGGA TCAAGGCGCC CGACAAGGTC
GATTAG
 
Protein sequence
MNDQPSPNLG ETIPDPPRGF MGRVRNYFLT GIVVAGPIAI TFYLTWWFVN WVDGFVRPFV 
PVDYRPETYL PFPVPGSGLV VAFVALTLLG FLTANLIGRT LVDLGERLLG RMPVVRAIYR
GLKQVFETLF SGNGSSLRKV GLVEFPSPGM WSIVLISLPP NEEVASRIPG GAEHISVFLP
CAPNPTTGFF FYVPKNKVIP IDMSAEEAAT LIMSAGVVQP GSDPQRKIAA LAATALAAKR
AAGEPESAFS RRRIKAPDKV D