| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2612 |
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| Symbol | |
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| ID | 4023109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2922488 |
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| End bp | 2925175 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962810 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_569742 |
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| Protein GI | 91977083 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.228291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00221032 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGCCG TCGTCGCTGT TCTGCTTTTC GTCACTGCCG CTCACGCTGG TCTCTGGGGC
ATCCTCCGGG ACAAACAGAA AGCCCCCGAC TTCAGCGGCA TTCTGCCGAG CGTGTCCTAC
GCACCGTTCG ACGGCTCCGC CCACCCCGAC GTCGATAACA TCCCGAGCGC CGAGCGCATC
CGCAGCGACT TGAAGACGCT CGCGCCGATG ACCCGGGCGA TCCGTCTATA TTCGTCGACC
GGCGGCGTCG AGCTGGTGCC CCCGATCGCC AACGAAGTGG GCATCAAGGT CACGGTCGGC
GCCTGGATCG ACAAGTTCAG CGACCGCAAC GAACGCGAAA TGCAGGCGGC CGTCGAACTC
GCCAAGCGCA ACGGCAACGT CAACGGCATC GTCGTCGGCA ACGAAACGAT CTACCGCGCC
GACCAGAAGG TCGAGGATCT GATCAAGCTG ATCCAGCGGG TGAAGAGCCA GGTCAATGTG
CCGGTCACCA CAGGCGAGAT CTGGAACATC TGGCTTGAGA ACCCCGAACT CGCGTCGTCG
GTGGACTTCA TCGCCGCGCA CATCCTGCCC TATTGGGAAG GCTTCTCGGA CAAGCAAGCG
GTCGATCAGG CGCTGATCAT CTACCAGAAG CTGCGCGACG CCTTCCCCGG CAAGCGCATC
GTGATCGCCG AATTCGGCTG GCCGAGCGCC GGCTACAATC TCAAGGCGGC GATCCCCGGG
CCGTTCGAGC AGGCAGTGAC GCTGCGCAAC TTCGTCAGCC GCGCCGAAGC CATCGGCATG
GAATACAACA TCGTCGAAGC GATCGACCAA CCCTGGAAGT ACTTCGAAGG CGGCGTCGGT
CCGTACTGGG GCATCCTCGA CGCGTCGCGG CACCCGAAAT TCGCCTGGAC CGGACCGGTG
GTCGATCCGG CGTATTGGAA GCTGGCCGGC ATCGCGCTGC TGGTCGGCAT TCTGTTGTCG
CTGCCGATTC TGCAGCTCGC CACCCCGACG GCGATGCAGA CCCTGTTGCT GTCCTCGGCC
GCGCACGGCG TCGGCGCCTG GGCCGCGACC GTATTCGCCT ATTGGACGGG GCATTATTTC
GTGTTCGGCT CGGCCTTCGC GCTGACGCTC GGCATGACCC TGCTGGTTCC GCTTGTGCTG
ATCGCACTGG CGCGCATCGA GGAAATCTCG GTCGTCGCCT TCGGCCACAA GCCGCGCCGG
CTGATCACGC GCGCGATGAC CGACGCCCAG CAGGCCGAGG CGAAGGCTTC CGGCGCCGTC
AGCTACCCCA AGGTGTCGAT CCACGTCCCG GCCTATTTCG AACCGCCGGA GATGCTGAAG
CAGACGCTCG ATGCGGTGGC GCAGCTCGAC TATCCGAACT TCGAATGCGT CGTGATCATC
AACAACACGC CGGATCCGGC TTTCACCCAG CCGATCCAGG ACCATTGCCG CGAACTCGGC
GAACGCTTCA AGTTCATCAA CGCCGAGAAG GTCCAGGGCT TCAAGGCCGG CGCGCTGCGG
ATCGCCATGG AGCGCACCGC CGTCGACGCC GAGATTATCG GCATCATCGA CGCCGACTAT
GTGGTGACGC CGGACTGGCT GAAGGATCTG GTGCCCGCCT TCGACGATCC GCGGGTCGGC
CTGGTCCAGG CGCCGCAGGA GCATCGCGAC GGCGACCGCT CGCTGATGCA CTACATCATG
AATGGCGAAT ACGCCGGCTT CTTCGACATC GGCATGGTCC AGCGCAACGA ATCCAACGGC
ATCATCGTGC ACGGCACGAT GTGCCTGATT CGTCGCGCCG CGATGGACAT GGCCGGCGGC
TGGTCGAGCG ACACGATCTG CGAGGACTCC GACCTCGGCC TCGAGATCAT GGAGCACGGC
TGGCTCACTC ACTACACGAA CACGCGCTAT GGCTACGGCC TGCTGCCGGA CACCTATGAG
GCGTTCAAGA AGCAGCGCCA TCGCTGGGCC TATGGCGGTT TTCAGATCAT CAAGAAGCAC
TGGCGCCGCT TCCTGCCCGG CAACAGCCGG CTGAGCCAGG ACCAGAAGCG CGAATTCGGC
CTCGGCTGGC TGAACTGGCT TGGCGCCGAA AGCCTCGGCG TGGTGGTGGC GATCCTCAAT
CTGATCTGGG TGCCGATCGT CGCCTTCGCC GACATCGCCA TCCCCGACAA GATCCTGACC
CTGCCGATCA TCGCCTCGTT CGTGGTGACG CTGGCGCACT TCCTGGTGCT GTACCGGCTG
CGGGTGAAGA TCAACGTGCC GCAGATGCTG GGCGCGATGA TCGCAGCAAT GTCGGTGCAG
TGGACGGTGT CACGCGCCGT CGCCCAGGGC CTGATCACCG AGCACCTCGC CTTCGCCCGC
ACGTCCAAGG GCGGCCTGAC GCTGATGTCG GTCGAGTTCC AGGCGTTCTG GGAGGCCGTG
ATCGGGGTCC TGCTGCTGAT CGGCGCGGGG GTGCTGGTGG CGTCCAACTC CTTCCGCCAG
ATCCACGAGA TCTACATCTT CGCCGGGGTG CTGGTGCTGC AGAGCCTGCC GTTCCTGTCG
GCGGTGGCGA TCGCGATCCT CGAGAACTCG CGAATCAACT CGTTTACGTG GTGGACCGAC
ACCCGCGTCC GCACCGCCGA GCTGATCGGC CTGCGGCCGG TGGCGCTGCC GCCGGCGCTC
CCGGCACGGC AGAAGGTGGC CCAGGAAATC CACCACGACG CCGCTTGA
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| Protein sequence | MRAVVAVLLF VTAAHAGLWG ILRDKQKAPD FSGILPSVSY APFDGSAHPD VDNIPSAERI
RSDLKTLAPM TRAIRLYSST GGVELVPPIA NEVGIKVTVG AWIDKFSDRN EREMQAAVEL
AKRNGNVNGI VVGNETIYRA DQKVEDLIKL IQRVKSQVNV PVTTGEIWNI WLENPELASS
VDFIAAHILP YWEGFSDKQA VDQALIIYQK LRDAFPGKRI VIAEFGWPSA GYNLKAAIPG
PFEQAVTLRN FVSRAEAIGM EYNIVEAIDQ PWKYFEGGVG PYWGILDASR HPKFAWTGPV
VDPAYWKLAG IALLVGILLS LPILQLATPT AMQTLLLSSA AHGVGAWAAT VFAYWTGHYF
VFGSAFALTL GMTLLVPLVL IALARIEEIS VVAFGHKPRR LITRAMTDAQ QAEAKASGAV
SYPKVSIHVP AYFEPPEMLK QTLDAVAQLD YPNFECVVII NNTPDPAFTQ PIQDHCRELG
ERFKFINAEK VQGFKAGALR IAMERTAVDA EIIGIIDADY VVTPDWLKDL VPAFDDPRVG
LVQAPQEHRD GDRSLMHYIM NGEYAGFFDI GMVQRNESNG IIVHGTMCLI RRAAMDMAGG
WSSDTICEDS DLGLEIMEHG WLTHYTNTRY GYGLLPDTYE AFKKQRHRWA YGGFQIIKKH
WRRFLPGNSR LSQDQKREFG LGWLNWLGAE SLGVVVAILN LIWVPIVAFA DIAIPDKILT
LPIIASFVVT LAHFLVLYRL RVKINVPQML GAMIAAMSVQ WTVSRAVAQG LITEHLAFAR
TSKGGLTLMS VEFQAFWEAV IGVLLLIGAG VLVASNSFRQ IHEIYIFAGV LVLQSLPFLS
AVAIAILENS RINSFTWWTD TRVRTAELIG LRPVALPPAL PARQKVAQEI HHDAA
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