Gene RPD_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2601 
Symbol 
ID4023097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2915336 
End bp2915803 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID637962798 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_569731 
Protein GI91977072 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0478945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA ACGAGAACAT CCTGATCCTC GAAACCACGC AGGGCGCCGT CAAGATCGAG 
CTTCGCCCAG ATCTGGCGCC GAACCACGTC GCCCGCATCA AGGAACTGGT GCGCGAGGGC
TTTTACGACG GCATCGTGTT TCATCGGGTG ATCGAGGGCT TCATGGCCCA GACCGGATGC
CCGCAGGGCA CCGGCACCGG CGGCTCGGGC AAAAAGCTCA AGGCCGAGTT CAACAAGGAG
CCGCATGTTC GTGGCACCGC CTCGATGGCG CGCGCCGCCA GCCCGGATTC CGGCGACAGC
CAATTCTTCA TCTGCTTCGA CGACGCCCGC TTCCTCGACA ACCAGTACAC GGTGTGGGGC
AAGGTGATCG AGGGCATGGA GAACGTCGAC AAGATCAAGC GCGGCGAGCC GGTGCAGAAC
CCGGACAAGA TCGTCAAGGC ACAGATCGCC GCCGACGCGG CGGCCTGA
 
Protein sequence
MADNENILIL ETTQGAVKIE LRPDLAPNHV ARIKELVREG FYDGIVFHRV IEGFMAQTGC 
PQGTGTGGSG KKLKAEFNKE PHVRGTASMA RAASPDSGDS QFFICFDDAR FLDNQYTVWG
KVIEGMENVD KIKRGEPVQN PDKIVKAQIA ADAAA