| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2591 |
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| Symbol | |
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| ID | 4023087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2903815 |
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| End bp | 2906103 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962788 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_569721 |
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| Protein GI | 91977062 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.682378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0198144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CAGAGACGTC GACCCAAACC GTTGACGACC CGTCGATCGC CGAGCCGCGC
ACGGCGACGT GGCGTAGGCT GTTGCCGCCG ATCGCCGTGG GCGTGGCGCT GCTGTCGGCG
TTTCTGACGT TCGTCGTCTT GACCGGGCTG GCGCCGATTT CGCCGACCCG GGACGTCGTG
GTGACGTTCC TGCTGATCAA CGCCGCCACC GTTCTGTTGC TGGTGGCGAT CATTGCCGGC
GAAGTCTGGA AAATTATCCA GGCCCGGCGC CGGGGCCGGG CAGCGGCGCG GCTGCATGTC
CAGATCGTCA GCCTGTTTTC GGTGATCGCG GTGCTGCCGG CGGTGCTGGT GTCGATCGTG
GCCAACGTCA CGCTCGACCG CGGCCTCGAC CGGCTGTTCT CCGGGCCGAC CCGCGCGGTG
ATCCAGAACT CGCTGATCGT CGCCAACGCC TATCTGCATG AGCACGGCCA GCTGATCCGC
GGCGATATTC TCGGCATGGC GAGCGACATC TCACATGCCC GACCGCTGTT CGATCAGGAC
CGCAAGTCGT TCCGCGAATT CCTCACCACC AATGCGGCGT CGCGCAATCT TCCCGGCGCG
ATGCTGATCG ATAAGGACCG CAATATCCTG GAATCGGCAC AGACCGGCAT CCAGCGCGAT
TTCGATACTC CTGCGCCCGA GTTTCTCGGC AATGTCGACG ACACCGAGCC GCAGATCGCC
GTGTTCATCG AGGCCAACTA CGTCGCTGCG GTAATCCGGC TGAAGAGTTT CGACGACACC
TTCCTTTATG TCGCCCGGCT GCTCGACCCG CGGGTGGTGG CGCAGCTGCG GCAGACCCAG
GCCAGCGTCG CTGAATATGC CGAGATCGAA GCGCGCCGGC TCGGCGTGCA GGTGGCGTTC
GCGCTGATGT TCACGGTGAT CGCGCTGACG GTGCTGATGT CGTCGGTGCT GATCGGGTTG
AACTTCGCCA ATTGGCTGGT GGCGCCGATC CGCCGCCTGA TGGGCGCGGC CAAGATGGTC
TCGACCGGCG ATCTGCACGT GCAGGTTCCG GTGTTCAAGT CCGAAGGCGA TCTCTCGCAA
CTCGGCGAGA CCTTCAACAA GATGACCAAG GAACTGCGCA CCCAGCGCGA CGAGCTGGTC
AGCGCCAGCG ACCTGATCGA CAGCCGCCGC CGTTTCATCG AGGCGGTGCT GTCGTCGGCC
AGCGCCGGCA TCATCGGCGT CGACGGTTCG CTCAGCATCG GCATTCTCAA CCGTTCGGCG
GAGAAGCTGA TCGGGCATTC GGAGTCGGAA ACGCTCGGCC ATCCGCTGTC CGAGGTTCTT
CCCGAACTCG ACGAGATGAT GGCGGCTGCC TGCGACGGCG CGCAACGGCT GGTGCAGGGG
CAGATCACCA TCACCCGCGA CGGCCGCGAG CGCATCCTGT CGGTGCGGGT CACGGCCGAG
CAGACCGGCC ATACGCGGGA CAGCTACATC ATCACCCTCG ATGATATCAC CGAGCTGGTC
TCGGCGCAGC GGACCTCCGC CTGGGGCGAT GTCGCTCGCC GGATCGCACA CGAGATCAAG
AACCCGCTGA CGCCGATCCA GCTCTCGGCG GAGCGGATCA AGCGCAAGTT CGGCAAGGTG
ATCATCGAAG ACAAGGGCAT CTTCGAGCAG TGCACCGACA CCATCGTCCG CCAGGTCGAC
GACATCCGGC GCATGGTCGA CGAATTCTCG CGCTTCGCGC GGATGCCGAA GCCGGTGATC
GAGGGCGAGG ATGTCGCCGA CACCATTCGT CAAGTCGTGT TCCTGATGCG CGTCGGGCAT
CCCGACGTCG ACATCGAAGC AGAGATCAAG GACGATCCGC TGCGGGCGCG GTTCGACCGC
CGCCTGATTT CGCAGGCGCT GACCAACATC ATCAAGAACG CGACCGAAGC GATCGAGGCC
GTGCCGCCCG AGGAACTCGG CAAGGGCAAG ATCGAAGTGG TCGCGGCGCG CGACGGCGAA
GACGTCGTGA TCGATGTGAT CGACAACGGC ATCGGCCTGC CCAAACAAAG CCGCTCGCGG
CTGCTCGAAC CCTACGTGAC GACGCGCGAG AAGGGCACCG GACTCGGGCT CGCGATCGTC
GGGCGGGTGC TGGTGGATCA CGGCGGGGGA ATCGAACTCA ACGACGCATC CGATATCAGG
CCCGGGCAAC GCGGCGCCTG GATGCGATTG CGATTCGCGA TGTCCGGGCA ACCCGTGGCA
CCGCCAGCCG GTGAACCAAA AACCAAAGTC GGCAACGAAC CAAGAATAGA AGCTGCGAGC
AGCGGTTGA
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| Protein sequence | MTSAETSTQT VDDPSIAEPR TATWRRLLPP IAVGVALLSA FLTFVVLTGL APISPTRDVV
VTFLLINAAT VLLLVAIIAG EVWKIIQARR RGRAAARLHV QIVSLFSVIA VLPAVLVSIV
ANVTLDRGLD RLFSGPTRAV IQNSLIVANA YLHEHGQLIR GDILGMASDI SHARPLFDQD
RKSFREFLTT NAASRNLPGA MLIDKDRNIL ESAQTGIQRD FDTPAPEFLG NVDDTEPQIA
VFIEANYVAA VIRLKSFDDT FLYVARLLDP RVVAQLRQTQ ASVAEYAEIE ARRLGVQVAF
ALMFTVIALT VLMSSVLIGL NFANWLVAPI RRLMGAAKMV STGDLHVQVP VFKSEGDLSQ
LGETFNKMTK ELRTQRDELV SASDLIDSRR RFIEAVLSSA SAGIIGVDGS LSIGILNRSA
EKLIGHSESE TLGHPLSEVL PELDEMMAAA CDGAQRLVQG QITITRDGRE RILSVRVTAE
QTGHTRDSYI ITLDDITELV SAQRTSAWGD VARRIAHEIK NPLTPIQLSA ERIKRKFGKV
IIEDKGIFEQ CTDTIVRQVD DIRRMVDEFS RFARMPKPVI EGEDVADTIR QVVFLMRVGH
PDVDIEAEIK DDPLRARFDR RLISQALTNI IKNATEAIEA VPPEELGKGK IEVVAARDGE
DVVIDVIDNG IGLPKQSRSR LLEPYVTTRE KGTGLGLAIV GRVLVDHGGG IELNDASDIR
PGQRGAWMRL RFAMSGQPVA PPAGEPKTKV GNEPRIEAAS SG
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